RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 TRBV6-4A0A1B0GX49 114 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 GYPEP15421 78 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 RPL39P62891 51 aaKnown RBP2.61□□□□□ -1.99
RTN4-208ENST00000404909 KRTAP21-3Q3LHN1 58 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 PYY3Q5JQD4 70 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 TM2D3Q9BRN9 247 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 EDA2RQ9HAV5 297 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 PAX4O43316 350 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 CIDEAO60543 219 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 TSHBP01222 138 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 C3orf79P0CE67 100 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 NANOS2P60321 138 aaKnown RBP2.61□□□□□ -1.99
RTN4-208ENST00000404909 DEFA6Q01524 100 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 COTL1Q14019 142 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 C12orf74Q32Q52 190 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 C2orf66Q6UXQ4 117 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 Q6ZTC4 211 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 C11orf45Q8TAV5 145 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 DNAJC30Q96LL9 226 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 MAP1LC3CQ9BXW4 147 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 PRO0255Q9UI72 69 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 TEX48A0A1B0GUV7 120 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 CRYBA4P53673 196 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 RPL32P62910 135 aaKnown RBP2.61□□□□□ -1.99
RTN4-208ENST00000404909 SCGB3A1Q96QR1 104 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 PMCHL2Q9BQD1 86 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 C11orf68Q9H3H3 251 aaKnown RBP2.61□□□□□ -1.99
RTN4-208ENST00000404909 K7EMI3 77 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 PRSS1P07477 247 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 CDPF1Q6NVV7 123 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 IFI27L1Q96BM0 104 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 CYSLTR1Q9Y271 337 aa2.61□□□□□ -1.99
RTN4-208ENST00000404909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 IGKV2-29A2NJV5 120 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 SYS1-DBNDD2H3BUS1 97 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 UBE2D3P61077 147 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 UBE2D2P62837 147 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 ATOH7Q8N100 152 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 C12orf57Q99622 126 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 DAZ3Q9NR90 486 aaKnown RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 TGP01266 2768 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 JOSD1Q15040 202 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 CEMP1Q6PRD7 247 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 Q6ZN92 141 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 TOMM6Q96B49 74 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 VSIG2Q96IQ7 327 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 ATP5LO75964 103 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 SMIM6P0DI80 62 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 G0S2P27469 103 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 SPATA12Q7Z6I5 190 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 C20orf203Q8NBC4 194 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 ATP6V0E2Q8NHE4 81 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 OPRPNQ99935 248 aaPredicted RBP2.6□□□□□ -1.99
RTN4-208ENST00000404909 B9D2Q9BPU9 175 aa2.6□□□□□ -1.99
RTN4-208ENST00000404909 FBN3Q75N90 2809 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 DEFB131BA0A096LNP1 70 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 NTM-AS1Q6ZSK4 140 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 ERASQ7Z444 233 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 CHCHD7Q9BUK0 85 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 C20orf202A1L168 122 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 UBE2L6O14933 153 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 RNASE13Q5GAN3 156 aaKnown RBP2.59□□□□□ -1.99
RTN4-208ENST00000404909 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 TENM2Q9NT68 2774 aa2.59□□□□□ -1.99
RTN4-208ENST00000404909 TRBV25-1A0A075B6N4 114 aa2.59□□□□□ -2
RTN4-208ENST00000404909 DGAT2L7PQ6IED9 249 aa2.59□□□□□ -2
RTN4-208ENST00000404909 PET117Q6UWS5 81 aa2.59□□□□□ -2
RTN4-208ENST00000404909 CHCHD5Q9BSY4 110 aa2.59□□□□□ -2
RTN4-208ENST00000404909 TRBV6-8A0A0A6YYG3 113 aa2.58□□□□□ -2
RTN4-208ENST00000404909 IGIPA6NJ69 53 aa2.58□□□□□ -2
RTN4-208ENST00000404909 TMEM262E9PQX1 116 aa2.58□□□□□ -2
RTN4-208ENST00000404909 LINC00694P0DN24 101 aa2.58□□□□□ -2
RTN4-208ENST00000404909 TCTAP57738 103 aa2.58□□□□□ -2
RTN4-208ENST00000404909 GAGE6Q13070 117 aa2.58□□□□□ -2
RTN4-208ENST00000404909 MRPL23Q16540 153 aaKnown RBP2.58□□□□□ -2
RTN4-208ENST00000404909 Q8N976 141 aa2.58□□□□□ -2
RTN4-208ENST00000404909 TMEM243Q9BU79 118 aa2.58□□□□□ -2
RTN4-208ENST00000404909 ICOSQ9Y6W8 199 aa2.58□□□□□ -2
RTN4-208ENST00000404909 MAJINQ3KP22 176 aa2.58□□□□□ -2
RTN4-208ENST00000404909 LBHQ53QV2 105 aaPredicted RBP2.58□□□□□ -2
RTN4-208ENST00000404909 AMMECR1LQ6DCA0 310 aa2.58□□□□□ -2
RTN4-208ENST00000404909 BAALCQ8WXS3 180 aa2.58□□□□□ -2
RTN4-208ENST00000404909 PAM16Q9Y3D7 125 aa2.58□□□□□ -2
RTN4-208ENST00000404909 PRSS29PA6NIE9 313 aa2.58□□□□□ -2
RTN4-208ENST00000404909 FGF6P10767 208 aa2.58□□□□□ -2
RTN4-208ENST00000404909 TMEM141Q96I45 108 aa2.58□□□□□ -2
RTN4-208ENST00000404909 TIMM17AQ99595 171 aa2.58□□□□□ -2
RTN4-208ENST00000404909 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
RTN4-208ENST00000404909 VCX2Q9H322 139 aa2.58□□□□□ -2
RTN4-208ENST00000404909 MRPL35Q9NZE8 188 aaKnown RBP2.58□□□□□ -2
RTN4-208ENST00000404909 LINC01549A6NIU2 74 aa2.57□□□□□ -2
RTN4-208ENST00000404909 ODF1Q14990 250 aa2.57□□□□□ -2
RTN4-208ENST00000404909 LINC01545Q5VT33 79 aa2.57□□□□□ -2
RTN4-208ENST00000404909 VAMP8Q9BV40 100 aa2.57□□□□□ -2
RTN4-208ENST00000404909 UBE2D4Q9Y2X8 147 aa2.57□□□□□ -2
RTN4-208ENST00000404909 IGLV4-3A0A075B6K6 122 aa2.57□□□□□ -2
RTN4-208ENST00000404909 TRAV10A0A0B4J240 114 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms