RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 GAGE7O76087 117 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 IGKCP01834 107 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 GAGE12FP0CL80 117 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 GAGE12GP0CL81 117 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 GAGE12IP0CL82 117 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 RPL39P62891 51 aaKnown RBP9.33□□□□□ -0.92
NDEL1-203ENST00000402554 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
NDEL1-203ENST00000402554 Q9UF83 564 aa9.33□□□□□ -0.92
NDEL1-203ENST00000402554 SMIM9A6NGZ8 99 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 IGIPA6NJ69 53 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
NDEL1-203ENST00000402554 STPG4Q8N801 248 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 TIMM17AQ99595 171 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 RETNQ9HD89 108 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 CIDEAO60543 219 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 EMP1P54849 157 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 ANKRD39Q53RE8 183 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 C20orf203Q8NBC4 194 aa9.32□□□□□ -0.92
NDEL1-203ENST00000402554 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
NDEL1-203ENST00000402554 F8VRH5 84 aa9.31□□□□□ -0.92
NDEL1-203ENST00000402554 K7EQD1 137 aa9.31□□□□□ -0.92
NDEL1-203ENST00000402554 PLNP26678 52 aa9.31□□□□□ -0.92
NDEL1-203ENST00000402554 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
NDEL1-203ENST00000402554 X6R8D5 127 aa9.31□□□□□ -0.92
NDEL1-203ENST00000402554 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 PRSS29PA6NIE9 313 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 NHLRC4P0CG21 123 aaPredicted RBP9.3□□□□□ -0.92
NDEL1-203ENST00000402554 COX8AP10176 69 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 CTAG1AP78358 180 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 TM2D3Q9BRN9 247 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 HHLA3Q9XRX5 114 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 TENM3Q9P273 2699 aa9.3□□□□□ -0.92
NDEL1-203ENST00000402554 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
NDEL1-203ENST00000402554 M0R143 59 aa9.29□□□□□ -0.92
NDEL1-203ENST00000402554 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
NDEL1-203ENST00000402554 DEFB135Q30KP9 77 aa9.29□□□□□ -0.92
NDEL1-203ENST00000402554 MRPL52Q86TS9 123 aaKnown RBP9.29□□□□□ -0.92
NDEL1-203ENST00000402554 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
NDEL1-203ENST00000402554 ZNRF2Q8NHG8 242 aa9.29□□□□□ -0.92
NDEL1-203ENST00000402554 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
NDEL1-203ENST00000402554 COTL1Q14019 142 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 PMVKQ15126 192 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 PHLDA1Q8WV24 401 aaPredicted RBP9.28□□□□□ -0.92
NDEL1-203ENST00000402554 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
NDEL1-203ENST00000402554 IGHV3-38A0A0C4DH36 116 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 TCTAP57738 103 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
NDEL1-203ENST00000402554 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 EREGO14944 169 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 LINC00612Q8N6U2 182 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 CST9LQ9H4G1 147 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
NDEL1-203ENST00000402554 TRBV6-4A0A1B0GX49 114 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 SPATA25Q9BR10 227 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 PYGO1Q9Y3Y4 419 aa9.26□□□□□ -0.93
NDEL1-203ENST00000402554 GAGE12JA6NER3 117 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 NMUP48645 174 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 UBE2D3P61077 147 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 UBE2D2P62837 147 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 GAGE1Q13065 139 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 GAGE4Q13068 117 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 GAGE5Q13069 117 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 FHL2Q14192 279 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 GAGE13Q4V321 117 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
NDEL1-203ENST00000402554 DAZ4Q86SG3 579 aaKnown RBP9.25□□□□□ -0.93
NDEL1-203ENST00000402554 DAZ3Q9NR90 486 aaKnown RBP9.25□□□□□ -0.93
NDEL1-203ENST00000402554 FGF6P10767 208 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 PAPPA-AS1Q5QFB9 102 aa9.25□□□□□ -0.93
NDEL1-203ENST00000402554 OPRPNQ99935 248 aaPredicted RBP9.25□□□□□ -0.93
NDEL1-203ENST00000402554 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
NDEL1-203ENST00000402554 LYRM9A8MSI8 78 aa9.24□□□□□ -0.93
NDEL1-203ENST00000402554 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
NDEL1-203ENST00000402554 NBEAL2Q6ZNJ1 2754 aa9.24□□□□□ -0.93
NDEL1-203ENST00000402554 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 IGKV2D-26A0A0A0MRZ7 120 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 DLEU1O43261 78 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 NPSP0C0P6 89 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 FAM222AQ5U5X8 452 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 RNF183Q96D59 192 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 C2orf88Q9BSF0 95 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 VCX2Q9H322 139 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
NDEL1-203ENST00000402554 IGHV4-28A0A0C4DH34 117 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
NDEL1-203ENST00000402554 MIFP14174 115 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 BATFQ16520 125 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 PCP2Q8IVA1 136 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 WWC2-AS2Q96NR7 200 aa9.23□□□□□ -0.93
NDEL1-203ENST00000402554 CRYBA4P53673 196 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms