RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CD28P10747 220 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 KRTAP10-9P60411 292 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 TRPT1Q86TN4 253 aaKnown RBP5.72□□□□□ -1.49
HDAC9-201ENST00000401921 IGHV3-38A0A0C4DH36 116 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 C4orf48Q5BLP8 95 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 PLEKHB2Q96CS7 222 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 XCL2Q9UBD3 114 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 J3QLI3 93 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 CFAP126Q5VTH2 177 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 TEN1Q86WV5 123 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 PEMTQ9UBM1 199 aa5.72□□□□□ -1.49
HDAC9-201ENST00000401921 HIVEP2P31629 2446 aa5.71□□□□□ -1.49
HDAC9-201ENST00000401921 TRAV25A0A0B4J276 109 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 ADARB2-AS1A8MUL3 147 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 PROK1P58294 105 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 A8MWV9 139 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 TMEM61Q8N0U2 210 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 TMEM126AQ9H061 195 aa5.71□□□□□ -1.5
HDAC9-201ENST00000401921 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 LINC01546A6NGU7 62 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 LINC01619G3V211 115 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 I3L3M4 83 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 IGHV3-53P01767 116 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 NPC2P61916 151 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 TAL2Q16559 108 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 CEMP1Q6PRD7 247 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-201ENST00000401921 TMEM141Q96I45 108 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 TRAV4A0A0B4J268 109 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-201ENST00000401921 POLR2KP53803 58 aaKnown RBP5.7□□□□□ -1.5
HDAC9-201ENST00000401921 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 SMIM9A6NGZ8 99 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 J3QQQ9 107 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 STHQ8IWL8 128 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 CARD19Q96LW7 228 aa5.7□□□□□ -1.5
HDAC9-201ENST00000401921 M0QY20 66 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 CRYGDP07320 174 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 IGHV4-31P0DP07 118 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 CFHR3Q02985 330 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 MRPL23Q16540 153 aaKnown RBP5.69□□□□□ -1.5
HDAC9-201ENST00000401921 ZFHX3Q15911 3703 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 Q6YL49 198 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 ZNF702PQ9H963 129 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
HDAC9-201ENST00000401921 VPS13CQ709C8 3753 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 LINC00315P59091 139 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 ZNF415Q09FC8 603 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 DEFB113Q30KQ7 82 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 CHD6Q8TD26 2715 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 CUBNO60494 3623 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 USP24Q9UPU5 2620 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-201ENST00000401921 TRGV1A0A0A0MS02 117 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-201ENST00000401921 HIST2H2BCQ6DN03 193 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 BBC3Q96PG8 261 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-201ENST00000401921 ANKRD29Q8N6D5 301 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 TIMM17AQ99595 171 aa5.68□□□□□ -1.5
HDAC9-201ENST00000401921 FLNAP21333 2647 aaKnown RBP5.67□□□□□ -1.5
HDAC9-201ENST00000401921 IGKV3OR2-268A0A0C4DH90 116 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 TRBV27A0A0K0K1C4 114 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 LGALS9O00182 355 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 TSHBP01222 138 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 C20orf203Q8NBC4 194 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 ZNRF2Q8NHG8 242 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 C9orf85Q96MD7 179 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 TRBV7-3A0A075B6L6 115 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 TMEM89A2RUT3 159 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 H3BMM0 161 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 CRLF1O75462 422 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 LINC00694P0DN24 101 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
HDAC9-201ENST00000401921 M0R2P5 195 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 MXRA5Q9NR99 2828 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 TRAV8-3A0A0A6YYJ7 113 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 INSP01308 110 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 RHOHQ15669 191 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 TIMM21Q9BVV7 248 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 FBN2P35556 2912 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 A0A0J9YY99 117 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 C15orf53Q8NAA6 179 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 OR13C6PQ8NH95 151 aa5.66□□□□□ -1.5
HDAC9-201ENST00000401921 ZNF625Q96I27 306 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-201ENST00000401921 NF1P21359 2839 aa5.65□□□□□ -1.5
HDAC9-201ENST00000401921 RPL35AP18077 110 aaKnown RBP5.65□□□□□ -1.5
HDAC9-201ENST00000401921 C10orf126Q8N4M7 172 aa5.65□□□□□ -1.5
HDAC9-201ENST00000401921 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
HDAC9-201ENST00000401921 CITED2Q99967 270 aaPredicted RBP5.65□□□□□ -1.5
HDAC9-201ENST00000401921 ITPR3Q14573 2671 aa5.65□□□□□ -1.5
HDAC9-201ENST00000401921 NXPH4O95158 308 aa5.65□□□□□ -1.51
HDAC9-201ENST00000401921 RBMY1A1P0DJD3 496 aaKnown RBP5.65□□□□□ -1.51
HDAC9-201ENST00000401921 RBMY1CP0DJD4 496 aa5.65□□□□□ -1.51
HDAC9-201ENST00000401921 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.51
HDAC9-201ENST00000401921 RBMY1FQ15415 496 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 434.4 ms