RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 H7C1H1 209 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 SNAI2O43623 268 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 LTAP01374 205 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 SSTP61278 116 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 NDUFA5Q16718 116 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 Q6ZRP5 223 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 FMC1Q96HJ9 113 aa9.24□□□□□ -0.93
IFITM3-201ENST00000399808 TRAV1-1A0A0B4J248 108 aa9.23□□□□□ -0.93
IFITM3-201ENST00000399808 MAP1LC3B2A6NCE7 125 aa9.23□□□□□ -0.93
IFITM3-201ENST00000399808 MBD3L1Q8WWY6 194 aa9.23□□□□□ -0.93
IFITM3-201ENST00000399808 MAP1LC3BQ9GZQ8 125 aa9.23□□□□□ -0.93
IFITM3-201ENST00000399808 M0QY20 66 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 CXCL1P09341 107 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 FHITP49789 147 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 UBE2G1P62253 170 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 CFAP161Q6P656 301 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 NKX6-2Q9C056 277 aaPredicted RBP9.22□□□□□ -0.93
IFITM3-201ENST00000399808 MED9Q9NWA0 146 aa9.22□□□□□ -0.93
IFITM3-201ENST00000399808 LINC00862A6NCI5 91 aa9.21□□□□□ -0.94
IFITM3-201ENST00000399808 OR5AL1P0C617 328 aa9.21□□□□□ -0.94
IFITM3-201ENST00000399808 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.94
IFITM3-201ENST00000399808 GVQW2A0A096LPI5 108 aaPredicted RBP9.2□□□□□ -0.94
IFITM3-201ENST00000399808 IFNA1P01562 189 aa9.2□□□□□ -0.94
IFITM3-201ENST00000399808 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
IFITM3-201ENST00000399808 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
IFITM3-201ENST00000399808 TAGLN2P37802 199 aaKnown RBP9.19□□□□□ -0.94
IFITM3-201ENST00000399808 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 RAB19A4D1S5 217 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 SMIM17P0DL12 118 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
IFITM3-201ENST00000399808 COMMD7Q86VX2 200 aa9.17□□□□□ -0.94
IFITM3-201ENST00000399808 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
IFITM3-201ENST00000399808 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
IFITM3-201ENST00000399808 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
IFITM3-201ENST00000399808 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
IFITM3-201ENST00000399808 A0A1B0GV50 99 aa9.16□□□□□ -0.94
IFITM3-201ENST00000399808 MGPP08493 103 aa9.16□□□□□ -0.94
IFITM3-201ENST00000399808 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
IFITM3-201ENST00000399808 PGLYRP4Q96LB8 373 aa9.16□□□□□ -0.94
IFITM3-201ENST00000399808 FAM210AQ96ND0 272 aa9.16□□□□□ -0.94
IFITM3-201ENST00000399808 AKR1C3P42330 323 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 UQCC3Q6UW78 93 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 SMDT1Q9H4I9 107 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 GNG13Q9P2W3 67 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.94
IFITM3-201ENST00000399808 UBE2L6O14933 153 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 BCL2P10415 239 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 FOXI1Q12951 378 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 PEA15Q15121 130 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 CST9LP1Q5W188 147 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
IFITM3-201ENST00000399808 A0A1W2PNN7 141 aa9.13□□□□□ -0.95
IFITM3-201ENST00000399808 AMTP48728 403 aa9.13□□□□□ -0.95
IFITM3-201ENST00000399808 CCL20P78556 96 aa9.13□□□□□ -0.95
IFITM3-201ENST00000399808 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
IFITM3-201ENST00000399808 EIF5A2Q9GZV4 153 aaKnown RBP9.13□□□□□ -0.95
IFITM3-201ENST00000399808 A0A0U1RQV1 116 aa9.12□□□□□ -0.95
IFITM3-201ENST00000399808 BAGE2Q86Y30 109 aa9.12□□□□□ -0.95
IFITM3-201ENST00000399808 NIT2Q9NQR4 276 aa9.12□□□□□ -0.95
IFITM3-201ENST00000399808 PAGE4O60829 102 aa9.11□□□□□ -0.95
IFITM3-201ENST00000399808 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
IFITM3-201ENST00000399808 PTTG1IPP53801 180 aa9.11□□□□□ -0.95
IFITM3-201ENST00000399808 MEF2BQ02080 365 aaPredicted RBP9.11□□□□□ -0.95
IFITM3-201ENST00000399808 COTL1Q14019 142 aa9.11□□□□□ -0.95
IFITM3-201ENST00000399808 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
IFITM3-201ENST00000399808 TRAV26-2A0A0B4J265 109 aa9.1□□□□□ -0.95
IFITM3-201ENST00000399808 CACNG7P62955 275 aa9.1□□□□□ -0.95
IFITM3-201ENST00000399808 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
IFITM3-201ENST00000399808 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
IFITM3-201ENST00000399808 PDE6DO43924 150 aa9.09□□□□□ -0.95
IFITM3-201ENST00000399808 S100A9P06702 114 aaKnown RBP9.09□□□□□ -0.95
IFITM3-201ENST00000399808 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
IFITM3-201ENST00000399808 TMEM250H0YL14 139 aa9.08□□□□□ -0.96
IFITM3-201ENST00000399808 SYCNQ0VAF6 134 aa9.08□□□□□ -0.96
IFITM3-201ENST00000399808 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
IFITM3-201ENST00000399808 PRR4Q16378 134 aa9.08□□□□□ -0.96
IFITM3-201ENST00000399808 FAT4Q6V0I7 4981 aa9.08□□□□□ -0.96
IFITM3-201ENST00000399808 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 MT-ND6P03923 174 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 NTF3P20783 257 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 XCL1P47992 114 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 FER1L6-AS1Q8NA97 138 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
IFITM3-201ENST00000399808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 SRSF3P84103 164 aaKnown RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 AMMECR1LQ6DCA0 310 aa9.06□□□□□ -0.96
IFITM3-201ENST00000399808 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 PHF5AQ7RTV0 110 aaKnown RBP9.06□□□□□ -0.96
IFITM3-201ENST00000399808 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
IFITM3-201ENST00000399808 C11orf52Q96A22 123 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms