RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 IGLV9-49A0A0B4J1Y8 123 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 FAM167A-AS1Q96KT0 104 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 DENND4CQ5VZ89 1909 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 LYPD6Q86Y78 171 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 C20orf173Q96LM9 149 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 LINC00467Q9BRT7 94 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 DOPEY2Q9Y3R5 2298 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 Q6ZSR3 168 aa9.03□□□□□ -0.96
CACNA1C-213ENST00000399629 C10orf91Q5T1B1 145 aa9.02□□□□□ -0.96
CACNA1C-213ENST00000399629 NEXN-AS1Q8NBZ9 246 aa9.02□□□□□ -0.96
CACNA1C-213ENST00000399629 USP17L23D6RBM5 183 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 K7ERS5 55 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 PDE6GP18545 87 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 NCOR1O75376 2440 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 BPY2O14599 106 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 CLEC2BQ92478 149 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 MBD6Q96DN6 1003 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 TRBV6-4A0A1B0GX49 114 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 WNK2Q9Y3S1 2297 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 CFAP126Q5VTH2 177 aa9.02□□□□□ -0.97
CACNA1C-213ENST00000399629 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 PKDREJQ9NTG1 2253 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 FSTL3O95633 263 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 IGLV4-69A0A075B6H9 119 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 LELP1Q5T871 98 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 PLA2G2EQ9NZK7 142 aa9.01□□□□□ -0.97
CACNA1C-213ENST00000399629 IGKV2-28A0A075B6P5 120 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 K7EP13 123 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 IGKV2D-28P01615 120 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 E9PLD3 99 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 COL4A3Q01955 1670 aa9□□□□□ -0.97
CACNA1C-213ENST00000399629 RETNQ9HD89 108 aa8.99□□□□□ -0.97
CACNA1C-213ENST00000399629 SS18L2Q9UHA2 77 aa8.99□□□□□ -0.97
CACNA1C-213ENST00000399629 ZNF106Q9H2Y7 1883 aaKnown RBP8.99□□□□□ -0.97
CACNA1C-213ENST00000399629 WFDC10BQ8IUB3 73 aa8.99□□□□□ -0.97
CACNA1C-213ENST00000399629 DOCK11Q5JSL3 2073 aa8.98□□□□□ -0.97
CACNA1C-213ENST00000399629 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
CACNA1C-213ENST00000399629 C22orf34Q6ZV56 151 aa8.98□□□□□ -0.97
CACNA1C-213ENST00000399629 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 PLXNB3Q9ULL4 1909 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 TCL1BO95988 128 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 IGLV2-14P01704 120 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 DCANP1Q8TF63 244 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 FAM236DA0A1B0GTK5 79 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 FAM236CP0DP71 79 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 OBSL1O75147 1896 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 SMIM20Q8N5G0 67 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
CACNA1C-213ENST00000399629 GVINP1Q7Z2Y8 2422 aa8.96□□□□□ -0.97
CACNA1C-213ENST00000399629 SPANXB1Q9NS25 103 aaPredicted RBP8.96□□□□□ -0.97
CACNA1C-213ENST00000399629 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
CACNA1C-213ENST00000399629 PCNX2A6NKB5 2137 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 KRTAP10-9P60411 292 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 TRAV23DV6A0A075B6W5 121 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 TEX49A0A1B0GTD5 131 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 FRMD6-AS1P0C7T7 363 aa8.96□□□□□ -0.98
CACNA1C-213ENST00000399629 TNRC6AQ8NDV7 1962 aaKnown RBP8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 MALRD1Q5VYJ5 2156 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 C19orf71A6NCJ1 209 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 IGLV2-8P01709 118 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 EBI3Q14213 229 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 MLST8Q9BVC4 326 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 TECTAO75443 2155 aa8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
CACNA1C-213ENST00000399629 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 DHRS4-AS1Q9P1J3 65 aa8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 ATOX1O00244 68 aa8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 RIF1Q5UIP0 2472 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 NHLRC4P0CG21 123 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 PROK1P58294 105 aa8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 LINC00574Q9H8X3 128 aa8.94□□□□□ -0.98
CACNA1C-213ENST00000399629 BRI3O95415 125 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 CIRBP-AS1Q8TBR5 109 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 M0R378 163 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 CD164L2Q6UWJ8 174 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 PLA2G1BP04054 148 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 RBX1P62877 108 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
CACNA1C-213ENST00000399629 C1orf158Q8N1D5 194 aa8.92□□□□□ -0.98
CACNA1C-213ENST00000399629 BRK1Q8WUW1 75 aa8.92□□□□□ -0.98
CACNA1C-213ENST00000399629 A0A0J9YXY3 114 aa8.91□□□□□ -0.98
CACNA1C-213ENST00000399629 CRYGBP07316 175 aa8.91□□□□□ -0.98
CACNA1C-213ENST00000399629 ZFAND3Q9H8U3 227 aa8.91□□□□□ -0.98
CACNA1C-213ENST00000399629 CEP192Q8TEP8 1941 aa8.91□□□□□ -0.98
CACNA1C-213ENST00000399629 MED13Q9UHV7 2174 aa8.91□□□□□ -0.98
CACNA1C-213ENST00000399629 Q6ZS46 218 aa8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 C3orf22Q8N5N4 141 aa8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 MRGPRG-AS1Q2M3A8 158 aa8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 SCXQ7RTU7 201 aa8.9□□□□□ -0.98
CACNA1C-213ENST00000399629 CDKN2A-AS1Q9UH64 79 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms