RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 MYO7BQ6PIF6 2116 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 MYCNOSP40205 109 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 LINC00574Q9H8X3 128 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 IGLV11-55A0A075B6I3 123 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 PCNX2A6NKB5 2137 aa7.3□□□□□ -1.24
SMAD9-203ENST00000399275 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 LY6DQ14210 128 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 CCKP06307 115 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 IGHV4-38-2P0DP08 117 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 Q8N7P7 452 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
SMAD9-203ENST00000399275 SPRNQ5BIV9 151 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 LINC00308Q8TCZ7 52 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 E7EUB6 86 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 CGB3P0DN86 165 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 CGB7P0DN87 165 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 POM121L12Q8N7R1 296 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.245e-8■■■■■ 38.8
SMAD9-203ENST00000399275 SEM1Q6ZVN7 128 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 RITA1Q96K30 269 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 CTSZQ9UBR2 303 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 C2orf16Q68DN1 1984 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 PLA2G2AP14555 144 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 ADAMTS9Q9P2N4 1935 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 SPAG11AQ6PDA7 123 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
SMAD9-203ENST00000399275 APOC4P55056 127 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 C22orf34Q6ZV56 151 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 C20orf203Q8NBC4 194 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 WFDC13Q8IUB5 93 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 IGFL3Q6UXB1 125 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 LINC00269Q8N2A0 174 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 CAMK2N2Q96S95 79 aa7.27□□□□□ -1.25
SMAD9-203ENST00000399275 CTSGP08311 255 aa7.26□□□□□ -1.25
SMAD9-203ENST00000399275 MUC22E2RYF6 1773 aaPredicted RBP7.26□□□□□ -1.25
SMAD9-203ENST00000399275 G3V318 75 aa7.26□□□□□ -1.25
SMAD9-203ENST00000399275 YLPM1P49750 1951 aaKnown RBP7.26□□□□□ -1.25
SMAD9-203ENST00000399275 TMEM263Q8WUH6 116 aaKnown RBP7.26□□□□□ -1.25
SMAD9-203ENST00000399275 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
SMAD9-203ENST00000399275 CREBBPQ92793 2442 aa7.26□□□□□ -1.25
SMAD9-203ENST00000399275 H3BUA1 57 aa7.26□□□□□ -1.25
SMAD9-203ENST00000399275 A0A087WZ39 114 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 IGF2-ASQ6U949 168 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 PIP4P2Q8N4L2 257 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 C3orf84H3BNL1 204 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 PRSS33Q8NF86 280 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 SPTBN2O15020 2390 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 DAZAP2Q15038 168 aaPredicted RBP7.25□□□□□ -1.25
SMAD9-203ENST00000399275 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 FAM215AQ9Y5M1 114 aa7.25□□□□□ -1.25
SMAD9-203ENST00000399275 UBE2DNLQ8IWF7 75 aa7.24□□□□□ -1.25
SMAD9-203ENST00000399275 Q8N3U1 123 aa7.24□□□□□ -1.25
SMAD9-203ENST00000399275 IGHV4-61A0A0C4DH41 118 aa7.24□□□□□ -1.25
SMAD9-203ENST00000399275 H3BUX3 64 aa7.24□□□□□ -1.25
SMAD9-203ENST00000399275 CRIP2P52943 208 aaPredicted RBP7.24□□□□□ -1.25
SMAD9-203ENST00000399275 UBE2D3P61077 147 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 UBE2D2P62837 147 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 FER1L5A0AVI2 2057 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 RNASE3P12724 160 aaKnown RBP7.23□□□□□ -1.25
SMAD9-203ENST00000399275 A0A096LPF7 62 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 PRAC2D3DTV9 90 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 IGLV1-47P01700 117 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 C1orf229Q6ZS94 237 aaPredicted RBP7.23□□□□□ -1.25
SMAD9-203ENST00000399275 EML6Q6ZMW3 1958 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 DKK4Q9UBT3 224 aa7.23□□□□□ -1.25
SMAD9-203ENST00000399275 DNAJC9-AS1A6NH13 148 aa7.22□□□□□ -1.25
SMAD9-203ENST00000399275 IGLV2-11P01706 119 aa7.22□□□□□ -1.25
SMAD9-203ENST00000399275 ARHGAP21Q5T5U3 1957 aa7.22□□□□□ -1.25
SMAD9-203ENST00000399275 NCOA6Q14686 2063 aaPredicted RBP7.22□□□□□ -1.25
SMAD9-203ENST00000399275 TNRC6BQ9UPQ9 1833 aaKnown RBP7.22□□□□□ -1.25
SMAD9-203ENST00000399275 NDUFA1O15239 70 aa7.22□□□□□ -1.25
SMAD9-203ENST00000399275 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
SMAD9-203ENST00000399275 ZNF80P51504 273 aaPredicted RBP7.22□□□□□ -1.25
SMAD9-203ENST00000399275 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.25
SMAD9-203ENST00000399275 IGHV7-81A0A0B4J1V7 117 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 CRIP1P50238 77 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 RNF185Q96GF1 192 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 PRM2P04554 102 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 LINC00336Q6ZUF6 198 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 PCNX3Q9H6A9 2034 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 ATG2AQ2TAZ0 1938 aa7.21□□□□□ -1.26
SMAD9-203ENST00000399275 SPTA1P02549 2419 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 H3BS24 57 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 WIPF1O43516 503 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 BRD3OSQ6XYD6 125 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 CACNA1GO43497 2377 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 LY6HO94772 140 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 DSCR9P59020 149 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 NCKAP5O14513 1909 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 COX6B1P14854 86 aa7.2□□□□□ -1.26
SMAD9-203ENST00000399275 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 HCG22E2RYF7 251 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 UBE2D1P51668 147 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 C6orf99Q4VX62 202 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 ARHGAP32A7KAX9 2087 aa7.19□□□□□ -1.26
SMAD9-203ENST00000399275 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms