RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 TRAV13-1A0A0B4J241 112 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 A8MZ25 164 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 E9PLD3 99 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 ZNF580Q9UK33 172 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE12JA6NER3 117 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 TSHBP01222 138 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE4Q13068 117 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE5Q13069 117 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE13Q4V321 117 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 HIGD1BQ9P298 99 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 SPINK8P0C7L1 97 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 TMEM141Q96I45 108 aa7.68□□□□□ -1.18
CPSF1P1-201ENST00000397477 TEX48A0A1B0GUV7 120 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 M0R2P5 195 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRBV7-9A0A0J9YWB2 115 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 C9orf85Q96MD7 179 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 TSSC4Q9Y5U2 329 aaPredicted RBP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1BA6NDE4 496 aaKnown RBP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1EA6NEQ0 496 aaKnown RBP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE7O76087 117 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 RBMY1DP0C7P1 496 aaKnown RBP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE12FP0CL80 117 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE12GP0CL81 117 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 GAGE12IP0CL82 117 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 DEFB114Q30KQ6 69 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 SMR3AQ99954 134 aa7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 NOP10Q9NPE3 64 aaKnown RBP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.18
CPSF1P1-201ENST00000397477 C20orf203Q8NBC4 194 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 LGALS9O00182 355 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 Q6ZSN1 163 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 IGIPA6NJ69 53 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 G3V4G9 280 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 TSPEAR-AS2P59090 65 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 DAND5Q8N907 189 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 TIMM21Q9BVV7 248 aa7.66□□□□□ -1.18
CPSF1P1-201ENST00000397477 TMEM89A2RUT3 159 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 A8MWV9 139 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 PF4P02776 101 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 C4orf3Q8WVX3 66 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 GCN1Q92616 2671 aaKnown RBP7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 A0A096LNT2 108 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 TRBV27A0A0K0K1C4 114 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 DEFB130BP0DP73 79 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 DEFB130AP0DP74 79 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 CRYBA4P53673 196 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 MORN3Q6PF18 240 aaPredicted RBP7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
CPSF1P1-201ENST00000397477 TM2D2Q9BX73 214 aa7.65□□□□□ -1.19
CPSF1P1-201ENST00000397477 IGLV4-69A0A075B6H9 119 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 BRI3O95415 125 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 LINC01546A6NGU7 62 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 TIMM17AQ99595 171 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 ATRQ13535 2644 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 UBE2L6O14933 153 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 PLA2G2AP14555 144 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 Q6ZTI0 123 aa7.64□□□□□ -1.19
CPSF1P1-201ENST00000397477 UNC79Q9P2D8 2635 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 IGLV4-3A0A075B6K6 122 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 PTH2Q96A98 100 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 A4D1N5 150 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 RHOHQ15669 191 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 Q6ZUT4 128 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 ESM1Q9NQ30 184 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 TRGV4A0A0C4DH28 118 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 MEIG1Q5JSS6 88 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 LINC00467Q9BRT7 94 aa7.63□□□□□ -1.19
CPSF1P1-201ENST00000397477 TRBV7-3A0A075B6L6 115 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 A0A096LPF7 62 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 CFAP126Q5VTH2 177 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 A0A0J9YY99 117 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 GAGE12HA6NDE8 117 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 TAL2Q16559 108 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 ODF3L2Q3SX64 289 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 MUSTN1Q8IVN3 82 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 RHODO00212 210 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 NXPH4O95158 308 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 NDUFA7O95182 113 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 UFSP1Q6NVU6 142 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 ODF3Q96PU9 254 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 NDUFA12Q9UI09 145 aa7.62□□□□□ -1.19
CPSF1P1-201ENST00000397477 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 TMEM262E9PQX1 116 aa7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 ERG28Q9UKR5 140 aa7.61□□□□□ -1.19
CPSF1P1-201ENST00000397477 IGHV3-30-3P0DP02 117 aa7.6□□□□□ -1.19
CPSF1P1-201ENST00000397477 TRBV6-5A0A0K0K1A5 114 aa7.6□□□□□ -1.19
CPSF1P1-201ENST00000397477 TSPAN13O95857 204 aa7.6□□□□□ -1.19
CPSF1P1-201ENST00000397477 LINC01006Q8NI28 216 aa7.6□□□□□ -1.19
CPSF1P1-201ENST00000397477 CHCHD5Q9BSY4 110 aa7.6□□□□□ -1.19
CPSF1P1-201ENST00000397477 GAGE6Q13070 117 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms