RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 P01737 135 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 ZNF56Q15929 161 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 AKR1C8PQ5T2L2 129 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 OR10AG1Q8NH19 301 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 STOML3Q8TAV4 291 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 DERL1Q9BUN8 251 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 MED28Q9H204 178 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 ALG5Q9Y673 324 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 TNXBP22105 4242 aa5.58□□□□□ -1.52
CAPN3-208ENST00000397204 TRBV25-1A0A075B6N4 114 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 H0Y8G0 127 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 SNAI2O43623 268 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 PFDN1O60925 122 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 OR5AL1P0C617 328 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 GZMBP10144 247 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 GAGE6Q13070 117 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 IQCJQ1A5X6 159 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 Q5BKY6 102 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 SPANXN1Q5VSR9 72 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 CST9LP1Q5W188 147 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
CAPN3-208ENST00000397204 IGHV3-64A0A075B6Q5 118 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 A0A087WYN8 130 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 IGHV1-24A0A0C4DH33 117 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 A0A1B0GUV1 79 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 hDV102S1A0JD36 115 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 MAP1LC3B2A6NCE7 125 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 SNAPINO95295 136 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 GIPP09681 153 aaPredicted RBP5.56□□□□□ -1.52
CAPN3-208ENST00000397204 SMIM17P0DL12 118 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 AKR1C3P42330 323 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 REG3AQ06141 175 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 MLST8Q9BVC4 326 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 MAP1LC3BQ9GZQ8 125 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 KIF25-AS1Q9Y6Z4 181 aa5.56□□□□□ -1.52
CAPN3-208ENST00000397204 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
CAPN3-208ENST00000397204 BAGE2Q86Y30 109 aa5.55□□□□□ -1.52
CAPN3-208ENST00000397204 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
CAPN3-208ENST00000397204 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
CAPN3-208ENST00000397204 IGLV10-54A0A075B6I4 117 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 MUC21A0A0G2JKD1 596 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 MUC21A0A140T8X8 626 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 H7C1H1 209 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 PAGE4O60829 102 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 SPACA4Q8TDM5 124 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 LINC01600Q96MT4 127 aa5.54□□□□□ -1.52
CAPN3-208ENST00000397204 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 A0A1B0GVG6 124 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 B5MCH6 92 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 M0QY20 66 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 TMUB2Q71RG4 321 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 MBD3L1Q8WWY6 194 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 AP1S3Q96PC3 154 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 CYTL1Q9NRR1 136 aa5.53□□□□□ -1.52
CAPN3-208ENST00000397204 RPS10P46783 165 aaKnown RBP5.52□□□□□ -1.53
CAPN3-208ENST00000397204 RAB5CP51148 216 aa5.52□□□□□ -1.53
CAPN3-208ENST00000397204 SFT2D1Q8WV19 159 aa5.52□□□□□ -1.53
CAPN3-208ENST00000397204 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 UMAD1C9J7I0 102 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 PHOX2AO14813 284 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 NDUFS6O75380 124 aaKnown RBP5.51□□□□□ -1.53
CAPN3-208ENST00000397204 CHTF8P0CG12 524 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 RASL11AQ6T310 242 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 NIT2Q9NQR4 276 aa5.51□□□□□ -1.53
CAPN3-208ENST00000397204 F2Z2F3 143 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 UBE2L6O14933 153 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 MGPP08493 103 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 IGLC6P0CF74 106 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 RAB4AP20338 218 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 SULT1A2P50226 295 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 NKX2-5P52952 324 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-208ENST00000397204 RPS20P60866 119 aaKnown RBP5.5□□□□□ -1.53
CAPN3-208ENST00000397204 CACNG7P62955 275 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 COX6A2Q02221 97 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 FER1L6-AS1Q8NA97 138 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 GTSF1Q8WW33 167 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 GFRA4Q9GZZ7 299 aa5.5□□□□□ -1.53
CAPN3-208ENST00000397204 GAGE12HA6NDE8 117 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 ARPC5O15511 151 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
CAPN3-208ENST00000397204 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 KCNRGQ8N5I3 272 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 C15orf56Q8N910 161 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 PRSS3P2Q8NHM4 247 aa5.49□□□□□ -1.53
CAPN3-208ENST00000397204 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 G3V3Q6 166 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 TRGC1P0CF51 173 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 REG3GQ6UW15 175 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 STPG4Q8N801 248 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 OR2D3Q8NGH3 330 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 TPPP3Q9BW30 176 aa5.48□□□□□ -1.53
CAPN3-208ENST00000397204 LINC00474Q9P2X8 69 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms