RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 HIGD1CA8MV81 97 aa9.19□□□□□ -0.94
SEC13-204ENST00000397099 LINC00269Q8N2A0 174 aa9.19□□□□□ -0.94
SEC13-204ENST00000397099 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
SEC13-204ENST00000397099 SRRM2Q9UQ35 2752 aaKnown RBP9.19□□□□□ -0.94
SEC13-204ENST00000397099 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 H7C423 109 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 AMTP48728 403 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 RIGQ13278 110 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 TMEM191AQ9H0A3 160 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 NAT8Q9UHE5 227 aa9.18□□□□□ -0.94
SEC13-204ENST00000397099 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 LECT2O14960 151 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 PPP1R17O96001 155 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 HAMPP81172 84 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 REG3AQ06141 175 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 WFDC2Q14508 124 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 Q5VSD8 79 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 ISOC2Q96AB3 205 aa9.17□□□□□ -0.94
SEC13-204ENST00000397099 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.16□□□□□ -0.94
SEC13-204ENST00000397099 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 FAM229AH3BQW9 127 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
SEC13-204ENST00000397099 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
SEC13-204ENST00000397099 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 A0A1B0GW15 77 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 I3L3M4 83 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 APCSP02743 223 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 RPL23P62829 140 aaKnown RBP9.15□□□□□ -0.94
SEC13-204ENST00000397099 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 Q6ZSA8 131 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 V9GYV3 84 aa9.15□□□□□ -0.94
SEC13-204ENST00000397099 HLA-DQA1P01909 254 aa9.14□□□□□ -0.95
SEC13-204ENST00000397099 ZNF25P17030 456 aaPredicted RBP9.14□□□□□ -0.95
SEC13-204ENST00000397099 ADIRFQ15847 76 aa9.14□□□□□ -0.95
SEC13-204ENST00000397099 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
SEC13-204ENST00000397099 FAT1Q14517 4588 aa9.13□□□□□ -0.95
SEC13-204ENST00000397099 PMCHP20382 165 aa9.13□□□□□ -0.95
SEC13-204ENST00000397099 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
SEC13-204ENST00000397099 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
SEC13-204ENST00000397099 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
SEC13-204ENST00000397099 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
SEC13-204ENST00000397099 S100A8P05109 93 aa9.12□□□□□ -0.95
SEC13-204ENST00000397099 RAB14P61106 215 aa9.12□□□□□ -0.95
SEC13-204ENST00000397099 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
SEC13-204ENST00000397099 RPL39LQ96EH5 51 aaKnown RBP9.12□□□□□ -0.95
SEC13-204ENST00000397099 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 PPP1R2P9O14990 202 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 RAB4AP20338 218 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 BTF3L4Q96K17 158 aa9.11□□□□□ -0.95
SEC13-204ENST00000397099 LINC00862A6NCI5 91 aa9.1□□□□□ -0.95
SEC13-204ENST00000397099 TCAPO15273 167 aa9.1□□□□□ -0.95
SEC13-204ENST00000397099 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
SEC13-204ENST00000397099 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
SEC13-204ENST00000397099 C9JQL5 133 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 F8W036 122 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 VCYO14598 125 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 RNASEKQ6P5S7 137 aaKnown RBP9.09□□□□□ -0.95
SEC13-204ENST00000397099 RNF185Q96GF1 192 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 AP5S1Q9NUS5 200 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
SEC13-204ENST00000397099 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
SEC13-204ENST00000397099 PRSS1P07477 247 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 FGF6P10767 208 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
SEC13-204ENST00000397099 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
SEC13-204ENST00000397099 PNRC1Q12796 327 aaPredicted RBP9.08□□□□□ -0.96
SEC13-204ENST00000397099 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 CHAC1Q9BUX1 264 aa9.08□□□□□ -0.96
SEC13-204ENST00000397099 PLA2G1BP04054 148 aaKnown RBP9.07□□□□□ -0.96
SEC13-204ENST00000397099 ESDP10768 282 aa9.07□□□□□ -0.96
SEC13-204ENST00000397099 CNBPP62633 177 aaKnown RBP9.07□□□□□ -0.96
SEC13-204ENST00000397099 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
SEC13-204ENST00000397099 MRPL52Q86TS9 123 aaKnown RBP9.07□□□□□ -0.96
SEC13-204ENST00000397099 C9orf163Q8N9P6 203 aa9.07□□□□□ -0.96
SEC13-204ENST00000397099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
SEC13-204ENST00000397099 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
SEC13-204ENST00000397099 C7orf77A4D0Y5 90 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 CCL25O15444 150 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 TSHBP01222 138 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 FCER1GP30273 86 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 SUMO2P61956 95 aaKnown RBP9.06□□□□□ -0.96
SEC13-204ENST00000397099 HBBP68871 147 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 OR5A1Q8NGJ0 315 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
SEC13-204ENST00000397099 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
SEC13-204ENST00000397099 PPBPP02775 128 aa9.05□□□□□ -0.96
SEC13-204ENST00000397099 CAMPP49913 170 aa9.05□□□□□ -0.96
SEC13-204ENST00000397099 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
SEC13-204ENST00000397099 DEFB104AQ8WTQ1 72 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms