RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DAZ4Q86SG3 579 aaKnown RBP14.32□□□□□ -0.12
VCPKMT-202ENST00000395860 DAZ3Q9NR90 486 aaKnown RBP14.32□□□□□ -0.12
VCPKMT-202ENST00000395860 TRAV26-1A0A087WT03 109 aa14.31□□□□□ -0.12
VCPKMT-202ENST00000395860 NHLRC4P0CG21 123 aaPredicted RBP14.31□□□□□ -0.12
VCPKMT-202ENST00000395860 COTL1Q14019 142 aa14.31□□□□□ -0.12
VCPKMT-202ENST00000395860 VSIG2Q96IQ7 327 aa14.31□□□□□ -0.12
VCPKMT-202ENST00000395860 LINC00694P0DN24 101 aa14.29□□□□□ -0.12
VCPKMT-202ENST00000395860 G0S2P27469 103 aa14.29□□□□□ -0.12
VCPKMT-202ENST00000395860 HSPB8Q9UJY1 196 aa14.29□□□□□ -0.12
VCPKMT-202ENST00000395860 C2orf66Q6UXQ4 117 aa14.28□□□□□ -0.12
VCPKMT-202ENST00000395860 LINC00173Q6ZV60 143 aa14.27□□□□□ -0.12
VCPKMT-202ENST00000395860 HUWE1Q7Z6Z7 4374 aaKnown RBP14.27□□□□□ -0.12
VCPKMT-202ENST00000395860 DEFB131BA0A096LNP1 70 aa14.27□□□□□ -0.13
VCPKMT-202ENST00000395860 TOMM6Q96B49 74 aa14.27□□□□□ -0.13
VCPKMT-202ENST00000395860 CYSLTR1Q9Y271 337 aa14.27□□□□□ -0.13
VCPKMT-202ENST00000395860 ATP6V0E2Q8NHE4 81 aa14.26□□□□□ -0.13
VCPKMT-202ENST00000395860 KRTDAPP60985 99 aa14.25□□□□□ -0.13
VCPKMT-202ENST00000395860 RPL39P62891 51 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 C20orf203Q8NBC4 194 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 GTSF1LQ9H1H1 148 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 ICOSQ9Y6W8 199 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 A0A096LPF7 62 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 LINC01549A6NIU2 74 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 MRPL23Q16540 153 aaKnown RBP14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 CHCHD7Q9BUK0 85 aa14.24□□□□□ -0.13
VCPKMT-202ENST00000395860 TRAV10A0A0B4J240 114 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 C3orf79P0CE67 100 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 NTM-AS1Q6ZSK4 140 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 IFI27L1Q96BM0 104 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 SCGB3A1Q96QR1 104 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 MAP1LC3CQ9BXW4 147 aa14.23□□□□□ -0.13
VCPKMT-202ENST00000395860 ATP5LO75964 103 aa14.22□□□□□ -0.13
VCPKMT-202ENST00000395860 H3BNG1 76 aa14.22□□□□□ -0.13
VCPKMT-202ENST00000395860 TMEM97Q5BJF2 176 aa14.22□□□□□ -0.13
VCPKMT-202ENST00000395860 DNAH9Q9NYC9 4486 aa14.21□□□□□ -0.13
VCPKMT-202ENST00000395860 ERASQ7Z444 233 aa14.2□□□□□ -0.14
VCPKMT-202ENST00000395860 SH2D6Q7Z4S9 175 aa14.2□□□□□ -0.14
VCPKMT-202ENST00000395860 TRBV25-1A0A075B6N4 114 aa14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 IGKV2-29A2NJV5 120 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 H0Y8G0 127 aa14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 TRBV6-8A0A0A6YYG3 113 aa14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
VCPKMT-202ENST00000395860 COL7A1Q02388 2944 aa14.18□□□□□ -0.14
VCPKMT-202ENST00000395860 MEGF8Q7Z7M0 2845 aa14.18□□□□□ -0.14
VCPKMT-202ENST00000395860 TMEM243Q9BU79 118 aa14.18□□□□□ -0.14
VCPKMT-202ENST00000395860 IGIPA6NJ69 53 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 JOSD1Q15040 202 aaPredicted RBP14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 Q6ZN92 141 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 TIMM17AQ99595 171 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 UBE2L6O14933 153 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 PRSS1P07477 247 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 PYY3Q5JQD4 70 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
VCPKMT-202ENST00000395860 PET117Q6UWS5 81 aa14.15□□□□□ -0.14
VCPKMT-202ENST00000395860 UBE2D4Q9Y2X8 147 aa14.15□□□□□ -0.14
VCPKMT-202ENST00000395860 PYGO1Q9Y3Y4 419 aa14.14□□□□□ -0.15
VCPKMT-202ENST00000395860 CEMP1Q6PRD7 247 aaPredicted RBP14.14□□□□□ -0.15
VCPKMT-202ENST00000395860 SPATA12Q7Z6I5 190 aa14.14□□□□□ -0.15
VCPKMT-202ENST00000395860 CHCHD5Q9BSY4 110 aa14.14□□□□□ -0.15
VCPKMT-202ENST00000395860 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
VCPKMT-202ENST00000395860 H7C423 109 aa14.13□□□□□ -0.15
VCPKMT-202ENST00000395860 SMIM6P0DI80 62 aa14.13□□□□□ -0.15
VCPKMT-202ENST00000395860 SMAGPQ0VAQ4 97 aa14.13□□□□□ -0.15
VCPKMT-202ENST00000395860 BAALCQ8WXS3 180 aa14.13□□□□□ -0.15
VCPKMT-202ENST00000395860 C20orf202A1L168 122 aa14.12□□□□□ -0.15
VCPKMT-202ENST00000395860 Q8N976 141 aa14.12□□□□□ -0.15
VCPKMT-202ENST00000395860 FGF6P10767 208 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 GAGE6Q13070 117 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 DGAT2L7PQ6IED9 249 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 OPRPNQ99935 248 aaPredicted RBP14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 TIMM21Q9BVV7 248 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 AMMECR1LQ6DCA0 310 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 LYPD5Q6UWN5 251 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 C15orf53Q8NAA6 179 aa14.11□□□□□ -0.15
VCPKMT-202ENST00000395860 IGLV4-3A0A075B6K6 122 aa14.1□□□□□ -0.15
VCPKMT-202ENST00000395860 LINC01545Q5VT33 79 aa14.1□□□□□ -0.15
VCPKMT-202ENST00000395860 MRPL52Q86TS9 123 aaKnown RBP14.1□□□□□ -0.15
VCPKMT-202ENST00000395860 PRKDCP78527 4128 aaKnown RBP14.1□□□□□ -0.15
VCPKMT-202ENST00000395860 IGLL5B9A064 214 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 NPSP0C0P6 89 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 PAPPA-AS1Q5QFB9 102 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 LGALS9CQ6DKI2 356 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 TRAV12-1A0A0B4J245 112 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 PMVKQ15126 192 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 LELP1Q5T871 98 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 PMCHL2Q9BQD1 86 aa14.09□□□□□ -0.15
VCPKMT-202ENST00000395860 TMEM101Q96IK0 257 aa14.08□□□□□ -0.16
VCPKMT-202ENST00000395860 CSDC2Q9Y534 153 aaKnown RBP14.08□□□□□ -0.16
VCPKMT-202ENST00000395860 A0A087WX48 190 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 TMEM262E9PQX1 116 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 TIRAPP58753 221 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 ODF1Q14990 250 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 ZC2HC1BQ5TFG8 222 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 FAM104AQ969W3 186 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 VCX2Q9H322 139 aa14.07□□□□□ -0.16
VCPKMT-202ENST00000395860 ZNF25P17030 456 aaPredicted RBP14.06□□□□□ -0.16
VCPKMT-202ENST00000395860 MRPS36P82909 103 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms