RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 DPH3P1Q9H4G8 78 aa10.44□□□□□ -0.74
CXCL12-206ENST00000395795 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
CXCL12-206ENST00000395795 H7C1H1 209 aa10.43□□□□□ -0.74
CXCL12-206ENST00000395795 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
CXCL12-206ENST00000395795 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
CXCL12-206ENST00000395795 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
CXCL12-206ENST00000395795 NIT2Q9NQR4 276 aa10.43□□□□□ -0.74
CXCL12-206ENST00000395795 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
CXCL12-206ENST00000395795 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 PANO1I0J062 215 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
CXCL12-206ENST00000395795 TRGC1P0CF51 173 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 CEBPGP53567 150 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
CXCL12-206ENST00000395795 SRSF3P84103 164 aaKnown RBP10.42□□□□□ -0.74
CXCL12-206ENST00000395795 REG3AQ06141 175 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 C14orf177Q52M58 125 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
CXCL12-206ENST00000395795 BIN3Q9NQY0 253 aa10.42□□□□□ -0.74
CXCL12-206ENST00000395795 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
CXCL12-206ENST00000395795 C9orf163Q8N9P6 203 aa10.41□□□□□ -0.74
CXCL12-206ENST00000395795 TMEM243Q9BU79 118 aa10.41□□□□□ -0.74
CXCL12-206ENST00000395795 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
CXCL12-206ENST00000395795 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
CXCL12-206ENST00000395795 KRTAP29-1A8MX34 341 aaPredicted RBP10.4□□□□□ -0.74
CXCL12-206ENST00000395795 C9JQL5 133 aa10.4□□□□□ -0.74
CXCL12-206ENST00000395795 SLPIP03973 132 aa10.4□□□□□ -0.74
CXCL12-206ENST00000395795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
CXCL12-206ENST00000395795 ZNF727A8MUV8 499 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 TWIST1Q15672 202 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 FAM74A3Q4VXF1 159 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 SDIM1Q6ZPB5 146 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
CXCL12-206ENST00000395795 SMIM7Q9BQ49 75 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 PKHD1L1Q86WI1 4243 aa10.39□□□□□ -0.75
CXCL12-206ENST00000395795 FAM231DQ6ZW35 169 aa10.38□□□□□ -0.75
CXCL12-206ENST00000395795 COMMD7Q86VX2 200 aa10.38□□□□□ -0.75
CXCL12-206ENST00000395795 FAT3Q8TDW7 4589 aa10.37□□□□□ -0.75
CXCL12-206ENST00000395795 GAS8-AS1O95177 125 aa10.37□□□□□ -0.75
CXCL12-206ENST00000395795 HNRNPA3P51991 378 aaKnown RBP10.36□□□□□ -0.75
CXCL12-206ENST00000395795 CNBPP62633 177 aaKnown RBP10.36□□□□□ -0.75
CXCL12-206ENST00000395795 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
CXCL12-206ENST00000395795 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
CXCL12-206ENST00000395795 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
CXCL12-206ENST00000395795 FAM231BA6NCW3 169 aa10.35□□□□□ -0.75
CXCL12-206ENST00000395795 AMTP48728 403 aa10.35□□□□□ -0.75
CXCL12-206ENST00000395795 COTL1Q14019 142 aa10.35□□□□□ -0.75
CXCL12-206ENST00000395795 CLRN3Q8NCR9 226 aa10.34□□□□□ -0.75
CXCL12-206ENST00000395795 NAT8Q9UHE5 227 aa10.34□□□□□ -0.75
CXCL12-206ENST00000395795 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
CXCL12-206ENST00000395795 CT83Q5H943 113 aa10.33□□□□□ -0.76
CXCL12-206ENST00000395795 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
CXCL12-206ENST00000395795 C15orf56Q8N910 161 aa10.33□□□□□ -0.76
CXCL12-206ENST00000395795 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
CXCL12-206ENST00000395795 TMEM218A2RU14 115 aa10.32□□□□□ -0.76
CXCL12-206ENST00000395795 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
CXCL12-206ENST00000395795 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.31□□□□□ -0.76
CXCL12-206ENST00000395795 IGKV2-29A2NJV5 120 aaPredicted RBP10.31□□□□□ -0.76
CXCL12-206ENST00000395795 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
CXCL12-206ENST00000395795 A8MWL6 223 aa10.31□□□□□ -0.76
CXCL12-206ENST00000395795 J3QL48 77 aa10.31□□□□□ -0.76
CXCL12-206ENST00000395795 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
CXCL12-206ENST00000395795 NCR2O95944 276 aa10.3□□□□□ -0.76
CXCL12-206ENST00000395795 ESDP10768 282 aa10.3□□□□□ -0.76
CXCL12-206ENST00000395795 RPL23P62829 140 aaKnown RBP10.3□□□□□ -0.76
CXCL12-206ENST00000395795 GAGE12HA6NDE8 117 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 F8W036 122 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 UBE2L6O14933 153 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 TSHBP01222 138 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
CXCL12-206ENST00000395795 ADIRFQ15847 76 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
CXCL12-206ENST00000395795 HIGD1CA8MV81 97 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 H7C423 109 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 FGF6P10767 208 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
CXCL12-206ENST00000395795 PNRC1Q12796 327 aaPredicted RBP10.28□□□□□ -0.76
CXCL12-206ENST00000395795 NDUFA5Q16718 116 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 OSTCQ9NRP0 149 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 V9GYV3 84 aa10.28□□□□□ -0.76
CXCL12-206ENST00000395795 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
CXCL12-206ENST00000395795 CHCHD10Q8WYQ3 142 aaPredicted RBP10.27□□□□□ -0.77
CXCL12-206ENST00000395795 TMEM191AQ9H0A3 160 aa10.27□□□□□ -0.77
CXCL12-206ENST00000395795 APCSP02743 223 aa10.26□□□□□ -0.77
CXCL12-206ENST00000395795 RAB4AP20338 218 aa10.26□□□□□ -0.77
CXCL12-206ENST00000395795 FOXI1Q12951 378 aa10.26□□□□□ -0.77
CXCL12-206ENST00000395795 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
CXCL12-206ENST00000395795 IGKV3OR2-268A0A0C4DH90 116 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 I3L3M4 83 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 OXTP01178 125 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 SMIM15Q7Z3B0 74 aa10.25□□□□□ -0.77
CXCL12-206ENST00000395795 AMN1Q8IY45 258 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms