RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 GAGE6Q13070 117 aa8.84□□□□□ -0.99
HLA-DMA-202ENST00000395303 COTL1Q14019 142 aa8.84□□□□□ -0.99
HLA-DMA-202ENST00000395303 Q8N976 141 aa8.84□□□□□ -0.99
HLA-DMA-202ENST00000395303 NTN5Q8WTR8 489 aaPredicted RBP8.84□□□□□ -0.99
HLA-DMA-202ENST00000395303 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
HLA-DMA-202ENST00000395303 ANGP03950 147 aaKnown RBP8.83□□□□□ -1
HLA-DMA-202ENST00000395303 PNRC1Q12796 327 aaPredicted RBP8.83□□□□□ -1
HLA-DMA-202ENST00000395303 WFDC2Q14508 124 aa8.83□□□□□ -1
HLA-DMA-202ENST00000395303 Q8N814 137 aa8.83□□□□□ -1
HLA-DMA-202ENST00000395303 IGKV2D-24A0A075B6R9 120 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 A0A1B0GW15 77 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 SDHAF1A6NFY7 115 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 GAS8-AS1O95177 125 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
HLA-DMA-202ENST00000395303 MIAQ16674 131 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 AMN1Q8IY45 258 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 Q8N1X5 172 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 C20orf203Q8NBC4 194 aa8.82□□□□□ -1
HLA-DMA-202ENST00000395303 PPP1R2P9O14990 202 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 CRPP02741 224 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 FUSP35637 526 aaKnown RBP eCLIP8.81□□□□□ -1
HLA-DMA-202ENST00000395303 RPS10P46783 165 aaKnown RBP8.81□□□□□ -1
HLA-DMA-202ENST00000395303 AMTP48728 403 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 C1orf43Q9BWL3 253 aa8.81□□□□□ -1
HLA-DMA-202ENST00000395303 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 TRBV27A0A0K0K1C4 114 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 A0A1B0GXF2 115 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 H7C423 109 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 I3L3M4 83 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 KRTAP26-1Q6PEX3 210 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 UQCC3Q6UW78 93 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 ST20Q9HBF5 79 aa8.8□□□□□ -1
HLA-DMA-202ENST00000395303 PPP1R17O96001 155 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 APCSP02743 223 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 S100A8P05109 93 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 GCSHP23434 173 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 KRTAP10-1P60331 282 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 MRPL51Q4U2R6 128 aaKnown RBP8.79□□□□□ -1
HLA-DMA-202ENST00000395303 LINC00269Q8N2A0 174 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 NRACQ8N912 160 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 DEFB104AQ8WTQ1 72 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 BAALCQ8WXS3 180 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 ANAPC16Q96DE5 110 aa8.79□□□□□ -1
HLA-DMA-202ENST00000395303 FAT1Q14517 4588 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 IGLV5-52A0A0A0MRZ9 124 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 LINC00862A6NCI5 91 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 UBE2L6O14933 153 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 ESDP10768 282 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 PMCHP20382 165 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 REG3AQ06141 175 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
HLA-DMA-202ENST00000395303 TRAV8-4A0A0B4J246 113 aa8.77□□□□□ -1.01
HLA-DMA-202ENST00000395303 TSHBP01222 138 aa8.77□□□□□ -1.01
HLA-DMA-202ENST00000395303 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
HLA-DMA-202ENST00000395303 CAMPP49913 170 aa8.77□□□□□ -1.01
HLA-DMA-202ENST00000395303 HBBP68871 147 aa8.77□□□□□ -1.01
HLA-DMA-202ENST00000395303 TRBV24-1A0A075B6N3 115 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 TMEM218A2RU14 115 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 SMKR1H3BMG3 65 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 LECT2O14960 151 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 ADCYAP1P18509 176 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 RPL32P62910 135 aaKnown RBP8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 MRPL54Q6P161 138 aaKnown RBP8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 CLPSL2Q6UWE3 100 aa8.76□□□□□ -1.01
HLA-DMA-202ENST00000395303 F8W036 122 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 VCYO14598 125 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 ZNF25P17030 456 aaPredicted RBP8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 XGP55808 180 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 C14orf177Q52M58 125 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 TMEM242Q9NWH2 141 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 VPS13BQ7Z7G8 4022 aa8.75□□□□□ -1.01
HLA-DMA-202ENST00000395303 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 IGKV2-29A2NJV5 120 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 FGF6P10767 208 aa8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 MRPL52Q86TS9 123 aaKnown RBP8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 C20orf78Q9BR46 151 aa8.74□□□□□ -1.01
HLA-DMA-202ENST00000395303 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 PHOX2AO14813 284 aa8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 HLA-DQA1P01909 254 aa8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 PPBPP02775 128 aa8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
HLA-DMA-202ENST00000395303 C7orf77A4D0Y5 90 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 USP17L23D6RBM5 183 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 TNFRSF6BO95407 300 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 CKS2P33552 79 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 IMMP2LQ96T52 175 aa8.72□□□□□ -1.01
HLA-DMA-202ENST00000395303 IGLV10-54A0A075B6I4 117 aa8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 D6R8Y8 96 aa8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 NPYP01303 97 aa8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 Q6ZSA8 131 aa8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 MYCBP2O75592 4640 aa8.71□□□□□ -1.02
HLA-DMA-202ENST00000395303 TCAPO15273 167 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 PRSS1P07477 247 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms