RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 IGFL3Q6UXB1 125 aa9.27□□□□□ -0.92
SIN3A-202ENST00000394947 NLRC5Q86WI3 1866 aa9.27□□□□□ -0.92
SIN3A-202ENST00000394947 SPINK1P00995 79 aa9.27□□□□□ -0.93
SIN3A-202ENST00000394947 MED14OSP0DP75 135 aa9.27□□□□□ -0.93
SIN3A-202ENST00000394947 INAFM1C9JVW0 142 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 ADORA2A-AS1P86434 159 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 ZSWIM8A7E2V4 1837 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 ZNF80P51504 273 aaPredicted RBP9.26□□□□□ -0.93
SIN3A-202ENST00000394947 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 Q6ZVQ6 151 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
SIN3A-202ENST00000394947 KIF26AQ9ULI4 1882 aaPredicted RBP9.26□□□□□ -0.93
SIN3A-202ENST00000394947 UBE2D2P62837 147 aa9.25□□□□□ -0.93
SIN3A-202ENST00000394947 Q8N7P7 452 aa9.25□□□□□ -0.93
SIN3A-202ENST00000394947 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
SIN3A-202ENST00000394947 IL15RAQ13261 267 aa9.25□□□□□ -0.93
SIN3A-202ENST00000394947 Q8N976 141 aa9.25□□□□□ -0.93
SIN3A-202ENST00000394947 MED13Q9UHV7 2174 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 NCOA6Q14686 2063 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-202ENST00000394947 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 TIMM17BO60830 172 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 UFSP1Q6NVU6 142 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 ZNF106Q9H2Y7 1883 aaKnown RBP9.24□□□□□ -0.93
SIN3A-202ENST00000394947 PLXNA3P51805 1871 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 LOC100131303A0A0U1RQF7 123 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 CDKN2A-AS1Q9UH64 79 aa9.24□□□□□ -0.93
SIN3A-202ENST00000394947 C7orf33Q8WU49 177 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 H3BT86 120 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 SOSTDC1Q6X4U4 206 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 MYCNOSP40205 109 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 C20orf203Q8NBC4 194 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
SIN3A-202ENST00000394947 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 KIAA1549Q9HCM3 1950 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 PLA2G2AP14555 144 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 CIRBP-AS1Q8TBR5 109 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
SIN3A-202ENST00000394947 SHANK1Q9Y566 2161 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 A0A0J9YX75 114 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 TRIAP1O43715 76 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 GDF5OSQ5U4N7 250 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
SIN3A-202ENST00000394947 C10orf99Q6UWK7 81 aa9.21□□□□□ -0.93
SIN3A-202ENST00000394947 HILS1P60008 231 aa9.21□□□□□ -0.93
SIN3A-202ENST00000394947 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.93
SIN3A-202ENST00000394947 WISP2O76076 250 aa9.21□□□□□ -0.94
SIN3A-202ENST00000394947 HIGD1BQ9P298 99 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 Q8N9L7 120 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 BBC3Q96PG8 261 aaPredicted RBP9.2□□□□□ -0.94
SIN3A-202ENST00000394947 Q6Q795 121 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 NEXN-AS1Q8NBZ9 246 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 MAPKAPK5-AS1Q8N8E1 139 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
SIN3A-202ENST00000394947 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
SIN3A-202ENST00000394947 CCDC179H3BU77 68 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 CTRLP40313 264 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 PCNX1Q96RV3 2341 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 TRBV6-5A0A0K0K1A5 114 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 TMEM223A0PJW6 202 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 UQCRQO14949 82 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 ODF3L1Q8IXM7 274 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 CLUHP3Q96NS8 147 aa9.19□□□□□ -0.94
SIN3A-202ENST00000394947 PLXNA4Q9HCM2 1894 aa9.18□□□□□ -0.94
SIN3A-202ENST00000394947 ESRGQ1W209 222 aa9.18□□□□□ -0.94
SIN3A-202ENST00000394947 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
SIN3A-202ENST00000394947 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
SIN3A-202ENST00000394947 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
SIN3A-202ENST00000394947 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
SIN3A-202ENST00000394947 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
SIN3A-202ENST00000394947 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 LINC00308Q8TCZ7 52 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 GVINP1Q7Z2Y8 2422 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 IGLV2-8P01709 118 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 IGLV3-1P01715 115 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 MIFP14174 115 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 A6NDX4 124 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 PDE6GP18545 87 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 CNOT1A5YKK6 2376 aaKnown RBP9.16□□□□□ -0.94
SIN3A-202ENST00000394947 LTBP1Q14766 1721 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 IGLV2-14P01704 120 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 BEAN1Q3B7T3 259 aa9.16□□□□□ -0.94
SIN3A-202ENST00000394947 PLXNA2O75051 1894 aa9.15□□□□□ -0.94
SIN3A-202ENST00000394947 Q6ZQY7 126 aa9.15□□□□□ -0.94
SIN3A-202ENST00000394947 SPANXB1Q9NS25 103 aaPredicted RBP9.15□□□□□ -0.94
SIN3A-202ENST00000394947 MGAMO43451 1857 aa9.15□□□□□ -0.94
SIN3A-202ENST00000394947 DENND4CQ5VZ89 1909 aa9.15□□□□□ -0.94
SIN3A-202ENST00000394947 PSPHP1O15172 72 aa9.15□□□□□ -0.95
SIN3A-202ENST00000394947 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.95
SIN3A-202ENST00000394947 IGLV2-11P01706 119 aa9.15□□□□□ -0.95
SIN3A-202ENST00000394947 K7EMT4 169 aa9.14□□□□□ -0.95
SIN3A-202ENST00000394947 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
SIN3A-202ENST00000394947 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
SIN3A-202ENST00000394947 C19orf84I3L1E1 186 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms