RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 PMCHL1Q16048 86 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 TAL2Q16559 108 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 MRPL51Q4U2R6 128 aaKnown RBP4.29□□□□□ -1.72
CASC3-202ENST00000394114 PHLDA3Q9Y5J5 127 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 HLA-DRB4X5D2U9 266 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 NACAE9PAV3 2078 aa4.29□□□□□ -1.72
CASC3-202ENST00000394114 TRAV26-2A0A0B4J265 109 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 LOC389332A0A1B0GUA5 103 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 C10orf25Q5T742 122 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 FAM104BQ5XKR9 115 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 NDUFA11Q86Y39 141 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 ZNF324O75467 553 aaPredicted RBP4.28□□□□□ -1.72
CASC3-202ENST00000394114 RNASE3P12724 160 aaKnown RBP4.28□□□□□ -1.72
CASC3-202ENST00000394114 TSPOP30536 169 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 CKS2P33552 79 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 Q6ZN92 141 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 ZNF493Q6ZR52 646 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 MDFICQ9P1T7 246 aa4.28□□□□□ -1.72
CASC3-202ENST00000394114 IGHV3OR16-12A0A075B7B8 117 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 CRXO43186 299 aaPredicted RBP4.27□□□□□ -1.73
CASC3-202ENST00000394114 IGLV1-51P01701 117 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 OR5AL1P0C617 328 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 LINC00336Q6ZUF6 198 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 KCNS1Q96KK3 526 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 C2orf48Q96LS8 159 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 TMEM191AQ9H0A3 160 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 JPT2Q9H910 190 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 XCL2Q9UBD3 114 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 OXTP01178 125 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 NPYP01303 97 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 LINC00694P0DN24 101 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 NEGR1Q7Z3B1 354 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 ORMDL3Q8N138 153 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 C14orf178Q8N769 122 aaPredicted RBP4.27□□□□□ -1.73
CASC3-202ENST00000394114 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 PRELID3AQ96N28 172 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 ODF3Q96PU9 254 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 EDA2RQ9HAV5 297 aa4.27□□□□□ -1.73
CASC3-202ENST00000394114 IGHV1OR15-1A0A075B7D0 117 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 TRAV2A0A0B4J234 112 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 SPINK8P0C7L1 97 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 SMIM17P0DL12 118 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 C3orf56Q8N813 242 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 GATD1Q8NB37 220 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 VAMP8Q9BV40 100 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 IGLV5-37A0A075B6J1 123 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 MGPP08493 103 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 IFI27P40305 119 aaPredicted RBP4.26□□□□□ -1.73
CASC3-202ENST00000394114 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 TMEM101Q96IK0 257 aa4.26□□□□□ -1.73
CASC3-202ENST00000394114 IGLV5-45A0A087WSX0 123 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 IGHV3-16A0A0C4DH30 117 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 FAM236DA0A1B0GTK5 79 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 TEX48A0A1B0GUV7 120 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 FAM236CP0DP71 79 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 KRTDAPP60985 99 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 CACNG7P62955 275 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 KRTAP24-1Q3LI83 254 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 LINC01587Q99440 93 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 SCRT2Q9NQ03 307 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 IGHV1-24A0A0C4DH33 117 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 C9JAW5 83 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 TAX1BP3O14907 124 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 LINC00173Q6ZV60 143 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 DEFB125Q8N687 156 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 FAM218AQ96MZ4 157 aa4.25□□□□□ -1.73
CASC3-202ENST00000394114 IGHV4-4A0A075B6R2 117 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 INSP01308 110 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 TRPT1Q86TN4 253 aaKnown RBP4.24□□□□□ -1.73
CASC3-202ENST00000394114 RPL39LQ96EH5 51 aaKnown RBP4.24□□□□□ -1.73
CASC3-202ENST00000394114 AP1S3Q96PC3 154 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 U3KQK5 164 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 A8MTW9 85 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 MEIG1Q5JSS6 88 aa4.24□□□□□ -1.73
CASC3-202ENST00000394114 IGHV3-73A0A0B4J1V6 119 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 TRAV8-6A0A0B4J262 113 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 J3KT08 172 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 IGLL1P15814 213 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 TMEM97Q5BJF2 176 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 FAM19A1Q7Z5A9 133 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 DPH3P1Q9H4G8 78 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 J3QR89 54 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 ATOH7Q8N100 152 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 C1orf158Q8N1D5 194 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 NRACQ8N912 160 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 OR2K2Q8NGT1 345 aa4.23□□□□□ -1.73
CASC3-202ENST00000394114 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms