RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 RPL35P42766 123 aaKnown RBP9.57□□□□□ -0.88
CHMP3-202ENST00000393773 AMTP48728 403 aa9.57□□□□□ -0.88
CHMP3-202ENST00000393773 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
CHMP3-202ENST00000393773 SFT2D1Q8WV19 159 aa9.57□□□□□ -0.88
CHMP3-202ENST00000393773 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
CHMP3-202ENST00000393773 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
CHMP3-202ENST00000393773 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
CHMP3-202ENST00000393773 LYPD6BQ8NI32 183 aa9.56□□□□□ -0.88
CHMP3-202ENST00000393773 FAM213BQ8TBF2 198 aa9.56□□□□□ -0.88
CHMP3-202ENST00000393773 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
CHMP3-202ENST00000393773 CACNG7P62955 275 aa9.55□□□□□ -0.88
CHMP3-202ENST00000393773 COTL1Q14019 142 aa9.55□□□□□ -0.88
CHMP3-202ENST00000393773 TMUB2Q71RG4 321 aa9.55□□□□□ -0.88
CHMP3-202ENST00000393773 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
CHMP3-202ENST00000393773 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 C19orf71A6NCJ1 209 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 REG3GQ6UW15 175 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 OR2D3Q8NGH3 330 aa9.54□□□□□ -0.88
CHMP3-202ENST00000393773 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
CHMP3-202ENST00000393773 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
CHMP3-202ENST00000393773 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
CHMP3-202ENST00000393773 KCNRGQ8N5I3 272 aa9.53□□□□□ -0.88
CHMP3-202ENST00000393773 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
CHMP3-202ENST00000393773 TRGC1P0CF51 173 aa9.52□□□□□ -0.89
CHMP3-202ENST00000393773 FOXI1Q12951 378 aa9.52□□□□□ -0.89
CHMP3-202ENST00000393773 CTRLP40313 264 aa9.51□□□□□ -0.89
CHMP3-202ENST00000393773 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
CHMP3-202ENST00000393773 Q6ZNX1 250 aa9.51□□□□□ -0.89
CHMP3-202ENST00000393773 F2Z2F3 143 aa9.5□□□□□ -0.89
CHMP3-202ENST00000393773 NTF3P20783 257 aa9.5□□□□□ -0.89
CHMP3-202ENST00000393773 ZNF345Q14585 488 aa9.5□□□□□ -0.89
CHMP3-202ENST00000393773 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
CHMP3-202ENST00000393773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-202ENST00000393773 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
CHMP3-202ENST00000393773 IGKV2-29A2NJV5 120 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-202ENST00000393773 SMLR1H3BR10 107 aa9.49□□□□□ -0.89
CHMP3-202ENST00000393773 H2AFB1P0C5Y9 115 aa9.49□□□□□ -0.89
CHMP3-202ENST00000393773 Q6ZRP5 223 aa9.49□□□□□ -0.89
CHMP3-202ENST00000393773 GATD1Q8NB37 220 aa9.49□□□□□ -0.89
CHMP3-202ENST00000393773 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 AMMECR1LQ6DCA0 310 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 SMIM12Q96EX1 92 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 CARD19Q96LW7 228 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 MANBALQ9NQG1 85 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 PKIGQ9Y2B9 76 aa9.48□□□□□ -0.89
CHMP3-202ENST00000393773 XKRY2A2RUG3 117 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 NCR2O95944 276 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 FGF6P10767 208 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 CCL20P78556 96 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
CHMP3-202ENST00000393773 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 GNG13Q9P2W3 67 aa9.47□□□□□ -0.89
CHMP3-202ENST00000393773 RAB19A4D1S5 217 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 H7C423 109 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 IFNA1P01562 189 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 APCSP02743 223 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 XCL1P47992 114 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 GNG4P50150 75 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 RNASEKQ6P5S7 137 aaKnown RBP9.46□□□□□ -0.9
CHMP3-202ENST00000393773 C9orf62Q8N4C0 152 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.9
CHMP3-202ENST00000393773 MUC2Q02817 5179 aa9.45□□□□□ -0.9
CHMP3-202ENST00000393773 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
CHMP3-202ENST00000393773 BCL2L11O43521 198 aa9.45□□□□□ -0.9
CHMP3-202ENST00000393773 CCL25O15444 150 aa9.44□□□□□ -0.9
CHMP3-202ENST00000393773 ZNF25P17030 456 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-202ENST00000393773 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
CHMP3-202ENST00000393773 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
CHMP3-202ENST00000393773 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
CHMP3-202ENST00000393773 TWIST1Q15672 202 aa9.43□□□□□ -0.9
CHMP3-202ENST00000393773 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
CHMP3-202ENST00000393773 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-202ENST00000393773 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
CHMP3-202ENST00000393773 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
CHMP3-202ENST00000393773 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
CHMP3-202ENST00000393773 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-202ENST00000393773 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
CHMP3-202ENST00000393773 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
CHMP3-202ENST00000393773 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
CHMP3-202ENST00000393773 CAMPP49913 170 aa9.4□□□□□ -0.9
CHMP3-202ENST00000393773 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
CHMP3-202ENST00000393773 BIN3Q9NQY0 253 aa9.4□□□□□ -0.9
CHMP3-202ENST00000393773 PSORS1C2Q9UIG4 136 aa9.4□□□□□ -0.9
CHMP3-202ENST00000393773 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 PDE6DO43924 150 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 TSHBP01222 138 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 ESDP10768 282 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 CD164L2Q6UWJ8 174 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
CHMP3-202ENST00000393773 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
CHMP3-202ENST00000393773 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
CHMP3-202ENST00000393773 K7EN84 100 aa9.38□□□□□ -0.91
CHMP3-202ENST00000393773 BCL2P10415 239 aa9.38□□□□□ -0.91
CHMP3-202ENST00000393773 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
CHMP3-202ENST00000393773 TMEM101Q96IK0 257 aa9.38□□□□□ -0.91
CHMP3-202ENST00000393773 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms