RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
PDLIM7-204ENST00000393546 I3L3M4 83 aa12.73□□□□□ -0.37
PDLIM7-204ENST00000393546 EREGO14944 169 aa12.73□□□□□ -0.37
PDLIM7-204ENST00000393546 NCR2O95944 276 aa12.73□□□□□ -0.37
PDLIM7-204ENST00000393546 UBE2L6O14933 153 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 ANGP03950 147 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 CKS2P33552 79 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 RPS10P46783 165 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 UBE2WQ96B02 151 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 BTF3L4Q96K17 158 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 IMMP2LQ96T52 175 aa12.72□□□□□ -0.37
PDLIM7-204ENST00000393546 POLR2KP53803 58 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 RBX1P62877 108 aa12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 Q0VG73 95 aa12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 Q8N976 141 aa12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 RMI2Q96E14 147 aa12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 TMEM70Q9BUB7 260 aa12.71□□□□□ -0.37
PDLIM7-204ENST00000393546 NRACQ8N912 160 aa12.7□□□□□ -0.38
PDLIM7-204ENST00000393546 CARHSP1Q9Y2V2 147 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-204ENST00000393546 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
PDLIM7-204ENST00000393546 VCYO14598 125 aa12.69□□□□□ -0.38
PDLIM7-204ENST00000393546 CRPP02741 224 aa12.69□□□□□ -0.38
PDLIM7-204ENST00000393546 APCSP02743 223 aa12.69□□□□□ -0.38
PDLIM7-204ENST00000393546 DNAH11Q96DT5 4516 aa12.69□□□□□ -0.38
PDLIM7-204ENST00000393546 A0A087WTM6 91 aa12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 TRBV27A0A0K0K1C4 114 aa12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 PPBPP02775 128 aa12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 SUMO2P61956 95 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 SPATA12Q7Z6I5 190 aa12.68□□□□□ -0.38
PDLIM7-204ENST00000393546 IGKV2D-24A0A075B6R9 120 aa12.67□□□□□ -0.38
PDLIM7-204ENST00000393546 ENHOQ6UWT2 76 aa12.67□□□□□ -0.38
PDLIM7-204ENST00000393546 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
PDLIM7-204ENST00000393546 TRBV24-1A0A075B6N3 115 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 C7orf77A4D0Y5 90 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 D6R8Y8 96 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 H7C423 109 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 TSHBP01222 138 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 LINC00269Q8N2A0 174 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 CLRN3Q8NCR9 226 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 TMEM242Q9NWH2 141 aa12.66□□□□□ -0.38
PDLIM7-204ENST00000393546 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 S100PP25815 95 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 RHEBQ15382 184 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 TMEM136Q6ZRR5 245 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
PDLIM7-204ENST00000393546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 TRAV9-1A0A075B6T8 112 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 LRCOL1A6NCL2 159 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 FCER1GP30273 86 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 MIAQ16674 131 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 NDUFA5Q16718 116 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 C20orf203Q8NBC4 194 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 PRR34Q9NV39 138 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
PDLIM7-204ENST00000393546 PKHD1P08F94 4074 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 C16orf90A8MZG2 172 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 PHOX2AO14813 284 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 ESDP10768 282 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 KRTAP10-2P60368 255 aa12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
PDLIM7-204ENST00000393546 APOC3P02656 99 aa12.62□□□□□ -0.39
PDLIM7-204ENST00000393546 REG3AQ06141 175 aa12.62□□□□□ -0.39
PDLIM7-204ENST00000393546 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
PDLIM7-204ENST00000393546 CLPSL2Q6UWE3 100 aa12.62□□□□□ -0.39
PDLIM7-204ENST00000393546 PRELID3AQ96N28 172 aa12.62□□□□□ -0.39
PDLIM7-204ENST00000393546 NPYP01303 97 aa12.61□□□□□ -0.39
PDLIM7-204ENST00000393546 FGF6P10767 208 aa12.61□□□□□ -0.39
PDLIM7-204ENST00000393546 DYNC1H1Q14204 4646 aaKnown RBP12.61□□□□□ -0.39
PDLIM7-204ENST00000393546 TCAPO15273 167 aa12.6□□□□□ -0.39
PDLIM7-204ENST00000393546 MAPKAPK5-AS1Q8N8E1 139 aa12.6□□□□□ -0.39
PDLIM7-204ENST00000393546 BAALCQ8WXS3 180 aa12.6□□□□□ -0.39
PDLIM7-204ENST00000393546 TMEM101Q96IK0 257 aa12.6□□□□□ -0.39
PDLIM7-204ENST00000393546 SMIM2Q9BVW6 85 aa12.6□□□□□ -0.39
PDLIM7-204ENST00000393546 SNAPINO95295 136 aa12.59□□□□□ -0.39
PDLIM7-204ENST00000393546 ZNF25P17030 456 aaPredicted RBP12.59□□□□□ -0.39
PDLIM7-204ENST00000393546 SVBPQ8N300 66 aa12.59□□□□□ -0.39
PDLIM7-204ENST00000393546 LAMTOR2Q9Y2Q5 125 aa12.59□□□□□ -0.39
PDLIM7-204ENST00000393546 TRAV8-4A0A0B4J246 113 aa12.58□□□□□ -0.4
PDLIM7-204ENST00000393546 CDPF1Q6NVV7 123 aa12.58□□□□□ -0.4
PDLIM7-204ENST00000393546 Q8N814 137 aa12.58□□□□□ -0.4
PDLIM7-204ENST00000393546 LECT2O14960 151 aa12.57□□□□□ -0.4
PDLIM7-204ENST00000393546 SMAGPQ0VAQ4 97 aa12.57□□□□□ -0.4
PDLIM7-204ENST00000393546 OR5A1Q8NGJ0 315 aa12.57□□□□□ -0.4
PDLIM7-204ENST00000393546 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
PDLIM7-204ENST00000393546 COX19Q49B96 90 aa12.56□□□□□ -0.4
PDLIM7-204ENST00000393546 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-204ENST00000393546 NTN5Q8WTR8 489 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-204ENST00000393546 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 PRSS47A8MTI9 375 aa12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 WFDC2Q14508 124 aa12.55□□□□□ -0.4
PDLIM7-204ENST00000393546 DGAT2L7PQ6IED9 249 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms