RNA–Protein interactions for RNA: ENST00000390495.1

TRAJ42-201, Transcript of T cell receptor alpha joining 42, humanhuman

APPRIS P1 BASIC

Gene TRAJ42, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ42-201ENST00000390495 TRAV16A0A0A6YYK6 109 aaPredicted RBP-6.18□□□□□ -3.4
TRAJ42-201ENST00000390495 PPP1R17O96001 155 aa-6.18□□□□□ -3.4
TRAJ42-201ENST00000390495 APOA1P02647 267 aa-6.18□□□□□ -3.4
TRAJ42-201ENST00000390495 IFNA16P05015 189 aa-6.18□□□□□ -3.4
TRAJ42-201ENST00000390495 RPS12P25398 132 aaKnown RBP-6.18□□□□□ -3.4
TRAJ42-201ENST00000390495 CCDC179H3BU77 68 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 CST2P09228 141 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 TCL1AP56279 114 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 DYNLRB2Q8TF09 96 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 CCDC124Q96CT7 223 aaKnown RBP-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 CD109Q6YHK3 1445 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 MED23Q9ULK4 1368 aa-6.19□□□□□ -3.4
TRAJ42-201ENST00000390495 CAMSAP2Q08AD1 1489 aa-6.2□□□□□ -3.4
TRAJ42-201ENST00000390495 TMCO2Q7Z6W1 182 aaPredicted RBP-6.2□□□□□ -3.4
TRAJ42-201ENST00000390495 PARVBQ9HBI1 364 aa-6.2□□□□□ -3.4
TRAJ42-201ENST00000390495 DISP2A7MBM2 1401 aa-6.2□□□□□ -3.4
TRAJ42-201ENST00000390495 TRBV7-3A0A075B6L6 115 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 SPAARA0A1B0GVQ0 90 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 PGRMC1O00264 195 aaKnown RBP-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 MGPP08493 103 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 Q6ZUT4 128 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 BORCS7Q96B45 105 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 OR2J1Q9GZK6 312 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 PYCARDQ9ULZ3 195 aa-6.21□□□□□ -3.4
TRAJ42-201ENST00000390495 ABCC10Q5T3U5 1492 aa-6.22□□□□□ -3.4
TRAJ42-201ENST00000390495 BANF1O75531 89 aa-6.22□□□□□ -3.41
TRAJ42-201ENST00000390495 STAG3L3P0CL85 134 aa-6.22□□□□□ -3.41
TRAJ42-201ENST00000390495 TNNC1P63316 161 aa-6.22□□□□□ -3.41
TRAJ42-201ENST00000390495 METTL1Q9UBP6 276 aaKnown RBP-6.22□□□□□ -3.41
TRAJ42-201ENST00000390495 MUC22E2RYF6 1773 aaPredicted RBP-6.22□□□□□ -3.41
TRAJ42-201ENST00000390495 TNP1P09430 55 aa-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 PET100P0DJ07 73 aa-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 ST13P4Q8IZP2 240 aaPredicted RBP-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 IL20Q9NYY1 176 aa-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 TCOF1Q13428 1488 aaKnown RBP-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 ATAD2BQ9ULI0 1458 aa-6.23□□□□□ -3.41
TRAJ42-201ENST00000390495 HCG22E2RYF7 251 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 GALP22466 123 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 HSD17B12Q53GQ0 312 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 C10orf113Q5VZT2 155 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 BAGE2Q86Y30 109 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 FAM9BQ8IZU0 186 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 C10orf82Q8WW14 230 aa-6.24□□□□□ -3.41
TRAJ42-201ENST00000390495 PNMA8CA0A1B0GUJ8 204 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 F8VZ95 297 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 APOC3P02656 99 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 CALB1P05937 261 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 PLGLB1Q02325 96 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 TMEM263Q8WUH6 116 aaKnown RBP-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 A0A0G2JMZ2 1700 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 RAPGEF6Q8TEU7 1601 aa-6.25□□□□□ -3.41
TRAJ42-201ENST00000390495 UQCR11O14957 56 aa-6.26□□□□□ -3.41
TRAJ42-201ENST00000390495 CHP2O43745 196 aa-6.26□□□□□ -3.41
TRAJ42-201ENST00000390495 B2MP61769 119 aa-6.26□□□□□ -3.41
TRAJ42-201ENST00000390495 FDCSPQ8NFU4 85 aa-6.26□□□□□ -3.41
TRAJ42-201ENST00000390495 CFAP54Q96N23 3096 aa-6.26□□□□□ -3.41
TRAJ42-201ENST00000390495 MYH2Q9UKX2 1941 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 TGIF2-C20orf24A0A0A6YYL0 155 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 PDE6DO43924 150 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 DCUN1D2Q6PH85 259 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 V9GYH0 126 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 KIF27Q86VH2 1401 aa-6.27□□□□□ -3.41
TRAJ42-201ENST00000390495 PXDNQ92626 1479 aa-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 FAM223BA6NKX1 122 aa-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 OGNP20774 298 aaKnown RBP-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 LSM3P62310 102 aaKnown RBP-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 CDC37Q16543 378 aaPredicted RBP-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 UBE2D4Q9Y2X8 147 aa-6.28□□□□□ -3.41
TRAJ42-201ENST00000390495 CLDN24A6NM45 220 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 TMEM238C9JI98 176 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 TNNC2P02585 160 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 FABP2P12104 132 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 CCL2P13500 99 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 TPPP2P59282 170 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 LINC00312Q9Y6C7 94 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 RAD50Q92878 1312 aa-6.29□□□□□ -3.42
TRAJ42-201ENST00000390495 MYH6P13533 1939 aa-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 PCBD1P61457 104 aa-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 RPL19P84098 196 aaKnown RBP-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 ZNF818PQ6ZRF7 136 aa-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 CNPY4Q8N129 248 aa-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 QRICH2Q9H0J4 1663 aa-6.3□□□□□ -3.42
TRAJ42-201ENST00000390495 SMLR1H3BR10 107 aa-6.31□□□□□ -3.42
TRAJ42-201ENST00000390495 BLVRAP53004 296 aa-6.31□□□□□ -3.42
TRAJ42-201ENST00000390495 RPRMQ9NS64 109 aa-6.31□□□□□ -3.42
TRAJ42-201ENST00000390495 IMP3Q9NV31 184 aaKnown RBP-6.31□□□□□ -3.42
TRAJ42-201ENST00000390495 MBD5Q9P267 1494 aa-6.31□□□□□ -3.42
TRAJ42-201ENST00000390495 PIK3C2GO75747 1445 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 CLIP1P30622 1438 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 TRBV27A0A0K0K1C4 114 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 PPP5D1E7EU14 171 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 CRYBA4P53673 196 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 TMED2Q15363 201 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 NKAIN1Q4KMZ8 207 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 GINS3Q9BRX5 216 aa-6.32□□□□□ -3.42
TRAJ42-201ENST00000390495 TECPR2O15040 1411 aa-6.33□□□□□ -3.42
TRAJ42-201ENST00000390495 AIPO00170 330 aa-6.33□□□□□ -3.42
TRAJ42-201ENST00000390495 APOEP02649 317 aa-6.33□□□□□ -3.42
TRAJ42-201ENST00000390495 PP6455Q8WZ26 134 aa-6.33□□□□□ -3.42
TRAJ42-201ENST00000390495 BTF3L4Q96K17 158 aa-6.33□□□□□ -3.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms