RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 KLK12Q9UKR0 248 aa4.09□□□□□ -1.75
TRAV1-2-201ENST00000390423 TRBV25-1A0A075B6N4 114 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 IGKV2D-24A0A075B6R9 120 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 A8MWL6 223 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 TMEM262E9PQX1 116 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 CRPP02741 224 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 PKIAP61925 76 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 MPV17L2Q567V2 206 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 WDR73Q6P4I2 378 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 SMIM15Q7Z3B0 74 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 UBE2WQ96B02 151 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 BORCS7Q96B45 105 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 RMI2Q96E14 147 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 PGLYRP4Q96LB8 373 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
TRAV1-2-201ENST00000390423 TRAV26-2A0A0B4J265 109 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 IGHV1-24A0A0C4DH33 117 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 ANGP03950 147 aaKnown RBP4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 GAGE6Q13070 117 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 PEA15Q15121 130 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 ADIRFQ15847 76 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 IQCJQ1A5X6 159 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 C15orf54Q8N8G6 183 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 NIT2Q9NQR4 276 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 OSTCQ9NRP0 149 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 COX11Q9Y6N1 276 aa4.07□□□□□ -1.76
TRAV1-2-201ENST00000390423 HIGD1CA8MV81 97 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 C9JQL5 133 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 AMTP48728 403 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 FOXA3P55318 350 aaPredicted RBP4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 RPL23P62829 140 aaKnown RBP4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 RBX1P62877 108 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 SRSF3P84103 164 aaKnown RBP4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 Q0VG73 95 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 COTL1Q14019 142 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 FAM74A3Q4VXF1 159 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 ATRAIDQ6UW56 229 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 CLPSL2Q6UWE3 100 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 Q8N976 141 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 GATD1Q8NB37 220 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 TSKUQ8WUA8 353 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 ISOC2Q96AB3 205 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 RPL39LQ96EH5 51 aaKnown RBP4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 C1orf43Q9BWL3 253 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 NAT8Q9UHE5 227 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 V9GYV3 84 aa4.06□□□□□ -1.76
TRAV1-2-201ENST00000390423 A0A1B0GUT8 65 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 FAM231BA6NCW3 169 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 UBE2L6O14933 153 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 TMEM241Q24JQ0 296 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 LCE2AQ5TA79 106 aaPredicted RBP4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 ENHOQ6UWT2 76 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 Q6ZRU5 148 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 BAALCQ8WXS3 180 aa4.05□□□□□ -1.76
TRAV1-2-201ENST00000390423 HLA-DQA1P01909 254 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 APCSP02743 223 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 RIGQ13278 110 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 MIAQ16674 131 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 LINC00269Q8N2A0 174 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 C20orf203Q8NBC4 194 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 TMEM191AQ9H0A3 160 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 NAT8BQ9UHF3 227 aa4.04□□□□□ -1.76
TRAV1-2-201ENST00000390423 IGLV4-60A0A075B6I1 120 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 TRBV6-5A0A0K0K1A5 114 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 NCR2O95944 276 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 RAB14P61106 215 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 REG3AQ06141 175 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 MRAP2Q96G30 205 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 RNF185Q96GF1 192 aa4.03□□□□□ -1.76
TRAV1-2-201ENST00000390423 IGLV10-54A0A075B6I4 117 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 A0A1B0GUV1 79 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 SMIM27A0A1W2PRY6 76 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 IGKV2-29A2NJV5 120 aaPredicted RBP4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 SMKR1H3BMG3 65 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 PANO1I0J062 215 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 I3L3M4 83 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 RAB4AP20338 218 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 PMCHP20382 165 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 AMMECR1LQ6DCA0 310 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 MRPL54Q6P161 138 aaKnown RBP4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 ST20Q9HBF5 79 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 TMEM242Q9NWH2 141 aa4.02□□□□□ -1.77
TRAV1-2-201ENST00000390423 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
TRAV1-2-201ENST00000390423 CAMPP49913 170 aa4.01□□□□□ -1.77
TRAV1-2-201ENST00000390423 CLLU1Q5K131 121 aa4.01□□□□□ -1.77
TRAV1-2-201ENST00000390423 RNASEKQ6P5S7 137 aaKnown RBP4.01□□□□□ -1.77
TRAV1-2-201ENST00000390423 KRTAP26-1Q6PEX3 210 aa4.01□□□□□ -1.77
TRAV1-2-201ENST00000390423 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms