RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
CNEP1R1-201ENST00000389134 NIT2Q9NQR4 276 aa13.14□□□□□ -0.31
CNEP1R1-201ENST00000389134 ZNF664Q8N3J9 261 aa13.13□□□□□ -0.31
CNEP1R1-201ENST00000389134 MED28Q9H204 178 aa13.13□□□□□ -0.31
CNEP1R1-201ENST00000389134 A0A0U1RQV1 116 aa13.12□□□□□ -0.31
CNEP1R1-201ENST00000389134 DEFA1P59665 94 aa13.12□□□□□ -0.31
CNEP1R1-201ENST00000389134 PSORS1C2Q9UIG4 136 aa13.12□□□□□ -0.31
CNEP1R1-201ENST00000389134 PAGE4O60829 102 aa13.11□□□□□ -0.31
CNEP1R1-201ENST00000389134 CACNG7P62955 275 aa13.1□□□□□ -0.31
CNEP1R1-201ENST00000389134 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
CNEP1R1-201ENST00000389134 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
CNEP1R1-201ENST00000389134 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
CNEP1R1-201ENST00000389134 FOXI1Q12951 378 aa13.09□□□□□ -0.31
CNEP1R1-201ENST00000389134 AMMECR1LQ6DCA0 310 aa13.09□□□□□ -0.31
CNEP1R1-201ENST00000389134 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
CNEP1R1-201ENST00000389134 IGLC6P0CF74 106 aa13.08□□□□□ -0.32
CNEP1R1-201ENST00000389134 Q5BKY6 102 aa13.08□□□□□ -0.32
CNEP1R1-201ENST00000389134 ALG5Q9Y673 324 aa13.08□□□□□ -0.32
CNEP1R1-201ENST00000389134 TRAV26-2A0A0B4J265 109 aa13.07□□□□□ -0.32
CNEP1R1-201ENST00000389134 IGHV1-58A0A0C4DH39 117 aa13.07□□□□□ -0.32
CNEP1R1-201ENST00000389134 PFDN1O60925 122 aa13.06□□□□□ -0.32
CNEP1R1-201ENST00000389134 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
CNEP1R1-201ENST00000389134 PTTG1IPP53801 180 aa13.06□□□□□ -0.32
CNEP1R1-201ENST00000389134 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
CNEP1R1-201ENST00000389134 RNASEKQ6P5S7 137 aaKnown RBP13.05□□□□□ -0.32
CNEP1R1-201ENST00000389134 TMUB2Q71RG4 321 aa13.05□□□□□ -0.32
CNEP1R1-201ENST00000389134 LINC00526Q96FQ7 95 aa13.05□□□□□ -0.32
CNEP1R1-201ENST00000389134 F2Z2F3 143 aa13.04□□□□□ -0.32
CNEP1R1-201ENST00000389134 H7C423 109 aa13.04□□□□□ -0.32
CNEP1R1-201ENST00000389134 MT-ND6P03923 174 aa13.04□□□□□ -0.32
CNEP1R1-201ENST00000389134 SYCNQ0VAF6 134 aa13.04□□□□□ -0.32
CNEP1R1-201ENST00000389134 FXYD6-FXYD2A0A087WZ82 144 aa13.03□□□□□ -0.32
CNEP1R1-201ENST00000389134 XCL1P47992 114 aa13.03□□□□□ -0.32
CNEP1R1-201ENST00000389134 NCR2O95944 276 aa13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 GIPP09681 153 aaPredicted RBP13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 NTF3P20783 257 aa13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 PRR26Q8N8Z3 221 aa13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 OR2D3Q8NGH3 330 aa13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 OR5A1Q8NGJ0 315 aa13.02□□□□□ -0.33
CNEP1R1-201ENST00000389134 LOC107984640A0A0U1RRK4 108 aa13.01□□□□□ -0.33
CNEP1R1-201ENST00000389134 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
CNEP1R1-201ENST00000389134 FGF6P10767 208 aa13.01□□□□□ -0.33
CNEP1R1-201ENST00000389134 GAGE2BQ13066 116 aa13.01□□□□□ -0.33
CNEP1R1-201ENST00000389134 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
CNEP1R1-201ENST00000389134 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13□□□□□ -0.33
CNEP1R1-201ENST00000389134 A0A1W2PNN7 141 aa13□□□□□ -0.33
CNEP1R1-201ENST00000389134 IGKV2-29A2NJV5 120 aaPredicted RBP13□□□□□ -0.33
CNEP1R1-201ENST00000389134 XKRY2A2RUG3 117 aa13□□□□□ -0.33
CNEP1R1-201ENST00000389134 RPL35P42766 123 aaKnown RBP13□□□□□ -0.33
CNEP1R1-201ENST00000389134 KRTAP9-6A0A140TA67 174 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 CCL25O15444 150 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 C1orf137Q5JT78 98 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 Q6ZNX1 250 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 MBD3L1Q8WWY6 194 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 DIRC1Q969H9 104 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 ISOC2Q96AB3 205 aa12.99□□□□□ -0.33
CNEP1R1-201ENST00000389134 LINC00959A0A1B0GUT2 108 aa12.98□□□□□ -0.33
CNEP1R1-201ENST00000389134 APCSP02743 223 aa12.98□□□□□ -0.33
CNEP1R1-201ENST00000389134 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
CNEP1R1-201ENST00000389134 FAT4Q6V0I7 4981 aa12.97□□□□□ -0.33
CNEP1R1-201ENST00000389134 CAMPP49913 170 aa12.97□□□□□ -0.33
CNEP1R1-201ENST00000389134 GATD1Q8NB37 220 aa12.97□□□□□ -0.33
CNEP1R1-201ENST00000389134 BTF3L4Q96K17 158 aa12.97□□□□□ -0.33
CNEP1R1-201ENST00000389134 CYTL1Q9NRR1 136 aa12.97□□□□□ -0.33
CNEP1R1-201ENST00000389134 A0A1B0GV50 99 aa12.96□□□□□ -0.33
CNEP1R1-201ENST00000389134 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
CNEP1R1-201ENST00000389134 PRR4Q16378 134 aa12.96□□□□□ -0.33
CNEP1R1-201ENST00000389134 TMEM101Q96IK0 257 aa12.96□□□□□ -0.33
CNEP1R1-201ENST00000389134 IFNA1P01562 189 aa12.95□□□□□ -0.34
CNEP1R1-201ENST00000389134 SS18Q15532 418 aa12.95□□□□□ -0.34
CNEP1R1-201ENST00000389134 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
CNEP1R1-201ENST00000389134 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
CNEP1R1-201ENST00000389134 CENPWQ5EE01 88 aa12.94□□□□□ -0.34
CNEP1R1-201ENST00000389134 CD164L2Q6UWJ8 174 aa12.94□□□□□ -0.34
CNEP1R1-201ENST00000389134 C9orf62Q8N4C0 152 aa12.94□□□□□ -0.34
CNEP1R1-201ENST00000389134 FAM213BQ8TBF2 198 aa12.94□□□□□ -0.34
CNEP1R1-201ENST00000389134 IGLV4-69A0A075B6H9 119 aa12.93□□□□□ -0.34
CNEP1R1-201ENST00000389134 IGLV1-50A0A075B6I6 118 aa12.93□□□□□ -0.34
CNEP1R1-201ENST00000389134 IGLV7-43P04211 117 aa12.93□□□□□ -0.34
CNEP1R1-201ENST00000389134 UMAD1C9J7I0 102 aa12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 BCL2P10415 239 aa12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 EIF5AP63241 154 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 TWIST1Q15672 202 aa12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 EIF5AL1Q6IS14 154 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
CNEP1R1-201ENST00000389134 H0Y9J4 135 aa12.91□□□□□ -0.34
CNEP1R1-201ENST00000389134 APOMO95445 188 aa12.91□□□□□ -0.34
CNEP1R1-201ENST00000389134 RPL39LQ96EH5 51 aaKnown RBP12.91□□□□□ -0.34
CNEP1R1-201ENST00000389134 SMIM12Q96EX1 92 aa12.91□□□□□ -0.34
CNEP1R1-201ENST00000389134 SDHAF1A6NFY7 115 aa12.9□□□□□ -0.34
CNEP1R1-201ENST00000389134 CTRLP40313 264 aa12.9□□□□□ -0.34
CNEP1R1-201ENST00000389134 LCE2AQ5TA79 106 aaPredicted RBP12.9□□□□□ -0.34
CNEP1R1-201ENST00000389134 CNFNQ9BYD5 112 aa12.9□□□□□ -0.34
CNEP1R1-201ENST00000389134 TEX261Q6UWH6 196 aa12.89□□□□□ -0.35
CNEP1R1-201ENST00000389134 CAMK2N2Q96S95 79 aa12.89□□□□□ -0.35
CNEP1R1-201ENST00000389134 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
CNEP1R1-201ENST00000389134 I3L3M4 83 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms