RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 C19orf71A6NCJ1 209 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 F2Z2F3 143 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 SLPIP03973 132 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 TRGC1P0CF51 173 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 WDR73Q6P4I2 378 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 SMIM12Q96EX1 92 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 NIT2Q9NQR4 276 aa11.36□□□□□ -0.59
RPUSD3-201ENST00000383820 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
RPUSD3-201ENST00000383820 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
RPUSD3-201ENST00000383820 PLAC8Q9NZF1 115 aa11.35□□□□□ -0.59
RPUSD3-201ENST00000383820 UBE2L6O14933 153 aa11.34□□□□□ -0.59
RPUSD3-201ENST00000383820 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
RPUSD3-201ENST00000383820 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 CHTF8P0CG12 524 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 COTL1Q14019 142 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 ALKAL2Q6UX46 152 aa11.33□□□□□ -0.6
RPUSD3-201ENST00000383820 AMTP48728 403 aa11.32□□□□□ -0.6
RPUSD3-201ENST00000383820 C7orf33Q8WU49 177 aa11.32□□□□□ -0.6
RPUSD3-201ENST00000383820 BCL2P10415 239 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 GNG4P50150 75 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 MEF2BQ02080 365 aaPredicted RBP11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 BIN3Q9NQY0 253 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 MED9Q9NWA0 146 aa11.31□□□□□ -0.6
RPUSD3-201ENST00000383820 NTF3P20783 257 aa11.3□□□□□ -0.6
RPUSD3-201ENST00000383820 RAB19A4D1S5 217 aa11.29□□□□□ -0.6
RPUSD3-201ENST00000383820 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
RPUSD3-201ENST00000383820 PDE6DO43924 150 aa11.29□□□□□ -0.6
RPUSD3-201ENST00000383820 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
RPUSD3-201ENST00000383820 PHOX2AO14813 284 aa11.28□□□□□ -0.6
RPUSD3-201ENST00000383820 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
RPUSD3-201ENST00000383820 CTRLP40313 264 aa11.28□□□□□ -0.6
RPUSD3-201ENST00000383820 CNFNQ9BYD5 112 aa11.28□□□□□ -0.6
RPUSD3-201ENST00000383820 COX6A2Q02221 97 aa11.27□□□□□ -0.61
RPUSD3-201ENST00000383820 TRBV20OR9-2A0A075B6H5 130 aa11.26□□□□□ -0.61
RPUSD3-201ENST00000383820 H7C423 109 aa11.26□□□□□ -0.61
RPUSD3-201ENST00000383820 NCR2O95944 276 aa11.26□□□□□ -0.61
RPUSD3-201ENST00000383820 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
RPUSD3-201ENST00000383820 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 TAGLN2P37802 199 aaKnown RBP11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 CEBPGP53567 150 aa11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 PRSS3P2Q8NHM4 247 aa11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
RPUSD3-201ENST00000383820 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 TWIST1Q15672 202 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 AMMECR1LQ6DCA0 310 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 CHCHD10Q8WYQ3 142 aaPredicted RBP11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
RPUSD3-201ENST00000383820 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
RPUSD3-201ENST00000383820 GTSF1Q8WW33 167 aa11.23□□□□□ -0.61
RPUSD3-201ENST00000383820 PKIGQ9Y2B9 76 aa11.23□□□□□ -0.61
RPUSD3-201ENST00000383820 IGKV2-24A0A0C4DH68 120 aa11.22□□□□□ -0.61
RPUSD3-201ENST00000383820 TEX261Q6UWH6 196 aa11.22□□□□□ -0.61
RPUSD3-201ENST00000383820 STPG4Q8N801 248 aa11.22□□□□□ -0.61
RPUSD3-201ENST00000383820 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
RPUSD3-201ENST00000383820 APCSP02743 223 aa11.21□□□□□ -0.61
RPUSD3-201ENST00000383820 ZNF25P17030 456 aaPredicted RBP11.21□□□□□ -0.61
RPUSD3-201ENST00000383820 RNASEKQ6P5S7 137 aaKnown RBP11.21□□□□□ -0.61
RPUSD3-201ENST00000383820 RPP21Q9H633 154 aaKnown RBP11.21□□□□□ -0.61
RPUSD3-201ENST00000383820 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
RPUSD3-201ENST00000383820 FGF6P10767 208 aa11.2□□□□□ -0.62
RPUSD3-201ENST00000383820 FOXI1Q12951 378 aa11.2□□□□□ -0.62
RPUSD3-201ENST00000383820 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
RPUSD3-201ENST00000383820 EIF5A2Q9GZV4 153 aaKnown RBP11.2□□□□□ -0.62
RPUSD3-201ENST00000383820 A0A096LNI7 61 aa11.19□□□□□ -0.62
RPUSD3-201ENST00000383820 OR5A1Q8NGJ0 315 aa11.19□□□□□ -0.62
RPUSD3-201ENST00000383820 RPL39LQ96EH5 51 aaKnown RBP11.19□□□□□ -0.62
RPUSD3-201ENST00000383820 TNXBP22105 4242 aa11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 SDHAF1A6NFY7 115 aa11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 FAM210AQ96ND0 272 aa11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 LRP2P98164 4655 aa11.18□□□□□ -0.62
RPUSD3-201ENST00000383820 A0A0J9YXV3 536 aa11.17□□□□□ -0.62
RPUSD3-201ENST00000383820 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
RPUSD3-201ENST00000383820 LYPD6BQ8NI32 183 aa11.17□□□□□ -0.62
RPUSD3-201ENST00000383820 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
RPUSD3-201ENST00000383820 RNASE7Q9H1E1 156 aaKnown RBP11.17□□□□□ -0.62
RPUSD3-201ENST00000383820 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
RPUSD3-201ENST00000383820 I3L3M4 83 aa11.16□□□□□ -0.62
RPUSD3-201ENST00000383820 K7EN84 100 aa11.16□□□□□ -0.62
RPUSD3-201ENST00000383820 REG3GQ6UW15 175 aa11.16□□□□□ -0.62
RPUSD3-201ENST00000383820 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
RPUSD3-201ENST00000383820 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
RPUSD3-201ENST00000383820 LINC00959A0A1B0GUT2 108 aa11.15□□□□□ -0.62
RPUSD3-201ENST00000383820 PMCHP20382 165 aa11.15□□□□□ -0.62
RPUSD3-201ENST00000383820 XCL1P47992 114 aa11.15□□□□□ -0.62
RPUSD3-201ENST00000383820 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
RPUSD3-201ENST00000383820 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
RPUSD3-201ENST00000383820 TMEM250H0YL14 139 aa11.14□□□□□ -0.63
RPUSD3-201ENST00000383820 CCL25O15444 150 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms