RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 SLPIP03973 132 aa11.95□□□□□ -0.5
TMEM41A-202ENST00000382227 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
TMEM41A-202ENST00000382227 FAT3Q8TDW7 4589 aa11.95□□□□□ -0.5
TMEM41A-202ENST00000382227 UBE2L6O14933 153 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 PDE6DO43924 150 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 AMTP48728 403 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 COTL1Q14019 142 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 DPH3Q96FX2 82 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 BIN3Q9NQY0 253 aa11.94□□□□□ -0.5
TMEM41A-202ENST00000382227 SULT1A2P50226 295 aa11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 EIF5AL1Q6IS14 154 aaKnown RBP11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 WDR73Q6P4I2 378 aa11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 Q6ZRU5 148 aa11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 RNF185Q96GF1 192 aa11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
TMEM41A-202ENST00000382227 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
TMEM41A-202ENST00000382227 CTRLP40313 264 aa11.92□□□□□ -0.5
TMEM41A-202ENST00000382227 SPACA4Q8TDM5 124 aa11.92□□□□□ -0.5
TMEM41A-202ENST00000382227 A0A087WYN8 130 aa11.91□□□□□ -0.5
TMEM41A-202ENST00000382227 CHTF8P0CG12 524 aa11.91□□□□□ -0.5
TMEM41A-202ENST00000382227 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.5
TMEM41A-202ENST00000382227 NUDT11Q96G61 164 aa11.9□□□□□ -0.5
TMEM41A-202ENST00000382227 CNFNQ9BYD5 112 aa11.9□□□□□ -0.5
TMEM41A-202ENST00000382227 GAGE12HA6NDE8 117 aa11.89□□□□□ -0.51
TMEM41A-202ENST00000382227 BCL2P10415 239 aa11.89□□□□□ -0.51
TMEM41A-202ENST00000382227 TWIST1Q15672 202 aa11.89□□□□□ -0.51
TMEM41A-202ENST00000382227 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
TMEM41A-202ENST00000382227 C15orf56Q8N910 161 aa11.89□□□□□ -0.51
TMEM41A-202ENST00000382227 GATD1Q8NB37 220 aa11.88□□□□□ -0.51
TMEM41A-202ENST00000382227 PLAC8Q9NZF1 115 aa11.88□□□□□ -0.51
TMEM41A-202ENST00000382227 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
TMEM41A-202ENST00000382227 IGKV3OR2-268A0A0C4DH90 116 aa11.87□□□□□ -0.51
TMEM41A-202ENST00000382227 RPP21Q9H633 154 aaKnown RBP11.87□□□□□ -0.51
TMEM41A-202ENST00000382227 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
TMEM41A-202ENST00000382227 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
TMEM41A-202ENST00000382227 PKHD1L1Q86WI1 4243 aa11.86□□□□□ -0.51
TMEM41A-202ENST00000382227 UBR4Q5T4S7 5183 aa11.85□□□□□ -0.51
TMEM41A-202ENST00000382227 RPS10P46783 165 aaKnown RBP11.85□□□□□ -0.51
TMEM41A-202ENST00000382227 COX6A2Q02221 97 aa11.85□□□□□ -0.51
TMEM41A-202ENST00000382227 Q6ZNX1 250 aa11.85□□□□□ -0.51
TMEM41A-202ENST00000382227 K7EN84 100 aa11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 PHOX2AO14813 284 aa11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 NCR2O95944 276 aa11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 TAGLN2P37802 199 aaKnown RBP11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 HIGD2BQ4VC39 106 aa11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 C7orf33Q8WU49 177 aa11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 CHCHD10Q8WYQ3 142 aaPredicted RBP11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 RPL39LQ96EH5 51 aaKnown RBP11.84□□□□□ -0.51
TMEM41A-202ENST00000382227 H7C423 109 aa11.83□□□□□ -0.52
TMEM41A-202ENST00000382227 NDUFS6O75380 124 aaKnown RBP11.83□□□□□ -0.52
TMEM41A-202ENST00000382227 RNASEKQ6P5S7 137 aaKnown RBP11.83□□□□□ -0.52
TMEM41A-202ENST00000382227 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
TMEM41A-202ENST00000382227 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 APCSP02743 223 aa11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 TEX261Q6UWH6 196 aa11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 SMIM15Q7Z3B0 74 aa11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
TMEM41A-202ENST00000382227 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
TMEM41A-202ENST00000382227 FGF6P10767 208 aa11.81□□□□□ -0.52
TMEM41A-202ENST00000382227 FOXA3P55318 350 aaPredicted RBP11.81□□□□□ -0.52
TMEM41A-202ENST00000382227 MAJINQ3KP22 176 aa11.81□□□□□ -0.52
TMEM41A-202ENST00000382227 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
TMEM41A-202ENST00000382227 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
TMEM41A-202ENST00000382227 SLC51BQ86UW2 128 aa11.8□□□□□ -0.52
TMEM41A-202ENST00000382227 FOXI1Q12951 378 aa11.79□□□□□ -0.52
TMEM41A-202ENST00000382227 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
TMEM41A-202ENST00000382227 TCTE3Q8IZS6 198 aa11.78□□□□□ -0.52
TMEM41A-202ENST00000382227 STPG4Q8N801 248 aa11.78□□□□□ -0.52
TMEM41A-202ENST00000382227 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
TMEM41A-202ENST00000382227 I3L3M4 83 aa11.77□□□□□ -0.53
TMEM41A-202ENST00000382227 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
TMEM41A-202ENST00000382227 A0A096LNI7 61 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 A8MWL6 223 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 GATCO43716 136 aaKnown RBP11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 PMCHP20382 165 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 XCL1P47992 114 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 BTF3L4Q96K17 158 aa11.76□□□□□ -0.53
TMEM41A-202ENST00000382227 TMEM250H0YL14 139 aa11.75□□□□□ -0.53
TMEM41A-202ENST00000382227 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
TMEM41A-202ENST00000382227 LYPD6BQ8NI32 183 aa11.75□□□□□ -0.53
TMEM41A-202ENST00000382227 TMEM101Q96IK0 257 aa11.75□□□□□ -0.53
TMEM41A-202ENST00000382227 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
TMEM41A-202ENST00000382227 CCL25O15444 150 aa11.74□□□□□ -0.53
TMEM41A-202ENST00000382227 ESDP10768 282 aa11.74□□□□□ -0.53
TMEM41A-202ENST00000382227 LINC01600Q96MT4 127 aa11.74□□□□□ -0.53
TMEM41A-202ENST00000382227 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
TMEM41A-202ENST00000382227 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
TMEM41A-202ENST00000382227 TSHBP01222 138 aa11.73□□□□□ -0.53
TMEM41A-202ENST00000382227 CT83Q5H943 113 aa11.73□□□□□ -0.53
TMEM41A-202ENST00000382227 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
TMEM41A-202ENST00000382227 GAS8-AS1O95177 125 aa11.72□□□□□ -0.53
TMEM41A-202ENST00000382227 BORCS7Q96B45 105 aa11.72□□□□□ -0.53
TMEM41A-202ENST00000382227 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
TMEM41A-202ENST00000382227 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
TMEM41A-202ENST00000382227 ST20Q9HBF5 79 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms