RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 OR13C6PQ8NH95 151 aa9.25□□□□□ -0.93
CDX2-201ENST00000381020 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
CDX2-201ENST00000381020 TAX1BP3O14907 124 aa9.25□□□□□ -0.93
CDX2-201ENST00000381020 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
CDX2-201ENST00000381020 M0QY20 66 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 PRIMA1Q86XR5 153 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 SIVA1O15304 175 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 NDUFA12Q9UI09 145 aa9.24□□□□□ -0.93
CDX2-201ENST00000381020 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 A0A0J9YY99 117 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 ETDBQ3ZM63 59 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 ERG28Q9UKR5 140 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 TRAV25A0A0B4J276 109 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 H3BMG7 143 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 LY6G6DO95868 133 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 CRYGDP07320 174 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 CLPSL2Q6UWE3 100 aa9.23□□□□□ -0.93
CDX2-201ENST00000381020 MAPKAPK5-AS1Q8N8E1 139 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 F5H768 121 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 C12orf74Q32Q52 190 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 BRI3O95415 125 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 OCIAD2Q56VL3 154 aa9.22□□□□□ -0.93
CDX2-201ENST00000381020 FGF6P10767 208 aa9.21□□□□□ -0.93
CDX2-201ENST00000381020 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.93
CDX2-201ENST00000381020 LINC00158P58513 81 aa9.21□□□□□ -0.93
CDX2-201ENST00000381020 A0A1W2PPM0 123 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 CRLF1O75462 422 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 ODF3L2Q3SX64 289 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 TIMM17AQ99595 171 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 RNF152Q8N8N0 203 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 NEXN-AS1Q8NBZ9 246 aa9.21□□□□□ -0.94
CDX2-201ENST00000381020 UNC79Q9P2D8 2635 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 TRBV7-3A0A075B6L6 115 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 DAD1P61803 113 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 GCN1Q92616 2671 aaKnown RBP9.2□□□□□ -0.94
CDX2-201ENST00000381020 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
CDX2-201ENST00000381020 C2orf91Q6ZV80 131 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
CDX2-201ENST00000381020 E9PLD3 99 aa9.19□□□□□ -0.94
CDX2-201ENST00000381020 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
CDX2-201ENST00000381020 ITPR2Q14571 2701 aa9.19□□□□□ -0.94
CDX2-201ENST00000381020 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
CDX2-201ENST00000381020 MUC4Q99102 2169 aa9.19□□□□□ -0.94
CDX2-201ENST00000381020 K7EQD1 137 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 MALP21145 153 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 CFAP126Q5VTH2 177 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 TMEM263Q8WUH6 116 aaKnown RBP9.18□□□□□ -0.94
CDX2-201ENST00000381020 GTSF1LQ9H1H1 148 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 CSMD1Q96PZ7 3565 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 MORN3Q6PF18 240 aaPredicted RBP9.18□□□□□ -0.94
CDX2-201ENST00000381020 Q6ZUT4 128 aa9.18□□□□□ -0.94
CDX2-201ENST00000381020 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 K7EP34 96 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 DAND5Q8N907 189 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 SVEP1Q4LDE5 3571 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 HILS1P60008 231 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 C16orf74Q96GX8 76 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 ZNF580Q9UK33 172 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 HHLA3Q9XRX5 114 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 PFN2P35080 140 aa9.17□□□□□ -0.94
CDX2-201ENST00000381020 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 PAX4O43316 350 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 GYPEP15421 78 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
CDX2-201ENST00000381020 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.15□□□□□ -0.94
CDX2-201ENST00000381020 A0A1B0GV72 72 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 TAL2Q16559 108 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 CFAP161Q6P656 301 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 C9orf66Q5T8R8 295 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 Q9H8V8 135 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 HIGD1BQ9P298 99 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 MAST4O15021 2626 aa9.15□□□□□ -0.94
CDX2-201ENST00000381020 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.95
CDX2-201ENST00000381020 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.95
CDX2-201ENST00000381020 A4D1N5 150 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 RBMY1BA6NDE4 496 aaKnown RBP9.14□□□□□ -0.95
CDX2-201ENST00000381020 RBMY1EA6NEQ0 496 aaKnown RBP9.14□□□□□ -0.95
CDX2-201ENST00000381020 IGLL5B9A064 214 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 C9JAW5 83 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 TSHBP01222 138 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 RBMY1DP0C7P1 496 aaKnown RBP9.14□□□□□ -0.95
CDX2-201ENST00000381020 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 PRO1854Q9UHT4 67 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 CELSR2Q9HCU4 2923 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 A0A096LNT2 108 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 XCL1P47992 114 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 APOC4P55056 127 aa9.14□□□□□ -0.95
CDX2-201ENST00000381020 LEPROTO15243 131 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms