RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-202ENST00000380747 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
HMGN1-202ENST00000380747 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
HMGN1-202ENST00000380747 MYCBP2O75592 4640 aa6.22□□□□□ -1.41
HMGN1-202ENST00000380747 A0A087WX48 190 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 NIT1Q86X76 327 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 GATD1Q8NB37 220 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 NUP35Q8NFH5 326 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 CHCHD5Q9BSY4 110 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 NAT8BQ9UHF3 227 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 FAT1Q14517 4588 aa6.21□□□□□ -1.42
HMGN1-202ENST00000380747 SMIM27A0A1W2PRY6 76 aa6.2□□□□□ -1.42
HMGN1-202ENST00000380747 PSCAO43653 123 aa6.2□□□□□ -1.42
HMGN1-202ENST00000380747 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
HMGN1-202ENST00000380747 DEFB104AQ8WTQ1 72 aa6.2□□□□□ -1.42
HMGN1-202ENST00000380747 RPL39LQ96EH5 51 aaKnown RBP6.2□□□□□ -1.42
HMGN1-202ENST00000380747 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
HMGN1-202ENST00000380747 TRBV25-1A0A075B6N4 114 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 PPP1R2P9O14990 202 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 CAMPP49913 170 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 PNRC1Q12796 327 aaPredicted RBP6.19□□□□□ -1.42
HMGN1-202ENST00000380747 GAGE6Q13070 117 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 LAGE3Q14657 143 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 SPATA12Q7Z6I5 190 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 AMN1Q8IY45 258 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 Q8N1X5 172 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 MAPKAPK5-AS1Q8N8E1 139 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 FRZBQ92765 325 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 CHCHD7Q9BUK0 85 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 TMEM191AQ9H0A3 160 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 KLK12Q9UKR0 248 aa6.19□□□□□ -1.42
HMGN1-202ENST00000380747 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 C16orf90A8MZG2 172 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 RAB4AP20338 218 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 PKIAP61925 76 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 COTL1Q14019 142 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 ELOBQ15370 118 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 IQCJQ1A5X6 159 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 MPV17L2Q567V2 206 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 UQCC3Q6UW78 93 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 COMMD7Q86VX2 200 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 UBE2WQ96B02 151 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 TM2D2Q9BX73 214 aa6.18□□□□□ -1.42
HMGN1-202ENST00000380747 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
HMGN1-202ENST00000380747 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 A0A087WTM6 91 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 NCR2O95944 276 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 MT-ND4LP03901 98 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 ANGP03950 147 aaKnown RBP6.17□□□□□ -1.42
HMGN1-202ENST00000380747 AMTP48728 403 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 MRPL54Q6P161 138 aaKnown RBP6.17□□□□□ -1.42
HMGN1-202ENST00000380747 ATRAIDQ6UW56 229 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 Q8N976 141 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 MRAP2Q96G30 205 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 RNF185Q96GF1 192 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 ST20Q9HBF5 79 aa6.17□□□□□ -1.42
HMGN1-202ENST00000380747 IGKV2D-24A0A075B6R9 120 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 A0A1B0GW15 77 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 TMEM218A2RU14 115 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 SDHAF1A6NFY7 115 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 F8W036 122 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 UBE2L6O14933 153 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 GAS8-AS1O95177 125 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 CRPP02741 224 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 S100A8P05109 93 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 PMCHP20382 165 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 FUSP35637 526 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGN1-202ENST00000380747 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 RBX1P62877 108 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 RMI2Q96E14 147 aa6.16□□□□□ -1.42
HMGN1-202ENST00000380747 TRBV6-5A0A0K0K1A5 114 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 I3L3M4 83 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 ADCYAP1P18509 176 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 RPS10P46783 165 aaKnown RBP6.15□□□□□ -1.42
HMGN1-202ENST00000380747 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 HBBP68871 147 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 Q0VG73 95 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 FAM104BQ5XKR9 115 aa6.15□□□□□ -1.42
HMGN1-202ENST00000380747 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 APCSP02743 223 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 MRPL51Q4U2R6 128 aaKnown RBP6.14□□□□□ -1.43
HMGN1-202ENST00000380747 CLPSL2Q6UWE3 100 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 ENHOQ6UWT2 76 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 LINC00269Q8N2A0 174 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 COX11Q9Y6N1 276 aa6.14□□□□□ -1.43
HMGN1-202ENST00000380747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-202ENST00000380747 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
HMGN1-202ENST00000380747 LINC00862A6NCI5 91 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 LECT2O14960 151 aa6.13□□□□□ -1.43
HMGN1-202ENST00000380747 PPP1R17O96001 155 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms