RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 FAM19A1Q7Z5A9 133 aa4.97□□□□□ -1.61
RIPK1-202ENST00000380409 KLHL30-AS1Q8NEE0 82 aa4.97□□□□□ -1.61
RIPK1-202ENST00000380409 MBD3L2Q8NHZ7 208 aaPredicted RBP4.97□□□□□ -1.61
RIPK1-202ENST00000380409 FAM215AQ9Y5M1 114 aa4.97□□□□□ -1.61
RIPK1-202ENST00000380409 LRBAP50851 2863 aa4.96□□□□□ -1.61
RIPK1-202ENST00000380409 UNC79Q9P2D8 2635 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 GNLYP22749 145 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 GRNP28799 593 aaKnown RBP4.96□□□□□ -1.62
RIPK1-202ENST00000380409 TEX22C9J3V5 150 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 MSMPQ1L6U9 139 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 C2orf82Q6UX34 121 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 BUB3O43684 328 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 TSHBP01222 138 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 ZNF80P51504 273 aaPredicted RBP4.96□□□□□ -1.62
RIPK1-202ENST00000380409 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
RIPK1-202ENST00000380409 LITAFQ99732 161 aa4.96□□□□□ -1.62
RIPK1-202ENST00000380409 CSMD2Q7Z408 3487 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 IGHV4-4A0A075B6R2 117 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 TRAV13-1A0A0B4J241 112 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 A0A0J9YX75 114 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 RPL18AQ02543 176 aaKnown RBP4.95□□□□□ -1.62
RIPK1-202ENST00000380409 ZNF843Q8N446 348 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 MAPK1IP1LQ8NDC0 245 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 LINC00574Q9H8X3 128 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 IGKV3OR2-268A0A0C4DH90 116 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 C15orf32Q32M92 178 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 BEAN1Q3B7T3 259 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 SERP2Q8N6R1 65 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 TMEM167AQ8TBQ9 72 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 TRAV41A0A0B4J266 112 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 SPRY2O43597 315 aa4.95□□□□□ -1.62
RIPK1-202ENST00000380409 FP248Q71RG6 208 aaPredicted RBP4.95□□□□□ -1.62
RIPK1-202ENST00000380409 IGLV3-9A0A075B6K5 115 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 C11orf86A6NJI1 115 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 RNASE4P34096 147 aaKnown RBP4.94□□□□□ -1.62
RIPK1-202ENST00000380409 FHL2Q14192 279 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 C17orf77Q96MU5 243 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 VKORC1Q9BQB6 163 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 ZNF256Q9Y2P7 627 aaPredicted RBP4.94□□□□□ -1.62
RIPK1-202ENST00000380409 COL27A1Q8IZC6 1860 aaPredicted RBP4.94□□□□□ -1.62
RIPK1-202ENST00000380409 TP53TG1Q9Y2A0 90 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 PRRC2AP48634 2157 aaKnown RBP4.94□□□□□ -1.62
RIPK1-202ENST00000380409 H3BRN7 92 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 H3BS24 57 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 BUB1B-PAK6H3BSN5 160 aa4.94□□□□□ -1.62
RIPK1-202ENST00000380409 G3V318 75 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 IGLV2-23P01705 113 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 TMEM30BQ3MIR4 351 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 C22orf34Q6ZV56 151 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 RNF182Q8N6D2 247 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 TIMM21Q9BVV7 248 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 LOXP28300 417 aaPredicted RBP4.93□□□□□ -1.62
RIPK1-202ENST00000380409 HERVK_113P61574 105 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 VMO1Q7Z5L0 202 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 DYNLRB2Q8TF09 96 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 EEF1AKMT3Q96AZ1 226 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 IGKV3D-20A0A0C4DH25 116 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 J3QKU1 62 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 IGHV4-39P01824 125 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 CDSNQ15517 529 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 ZNF833PQ6ZTB9 187 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 LINC01561Q8N1V8 128 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 DAND5Q8N907 189 aa4.93□□□□□ -1.62
RIPK1-202ENST00000380409 CELSR1Q9NYQ6 3014 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 NBPF19A0A087WUL8 3843 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
RIPK1-202ENST00000380409 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 IGHV3-64A0A075B6Q5 118 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 IGIPA6NJ69 53 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 IGLV1-44P01699 117 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 PDE6HQ13956 83 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 BPESC1Q9GZL8 116 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 SDHAF1A6NFY7 115 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 C9orf139Q6ZV77 190 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 C10orf105Q8TEF2 133 aa4.92□□□□□ -1.62
RIPK1-202ENST00000380409 BSNQ9UPA5 3926 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 ORMDL2Q53FV1 153 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 SEM1Q6ZVN7 128 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 MUSTN1Q8IVN3 82 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 SCGB3A1Q96QR1 104 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 CCL19Q99731 98 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 TRAV12-2A0A075B6T6 113 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 IGHV3-73A0A0B4J1V6 119 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 UBE2E1P51965 193 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
RIPK1-202ENST00000380409 NDUFC2O95298 119 aa4.9□□□□□ -1.62
RIPK1-202ENST00000380409 NSUN5P1Q3KNT7 163 aa4.9□□□□□ -1.62
RIPK1-202ENST00000380409 H3BUX3 64 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 SAA4P35542 130 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 PAPPA-AS1Q5QFB9 102 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 C1orf158Q8N1D5 194 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 C11orf45Q8TAV5 145 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 TRAV26-2A0A0B4J265 109 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 ZNF876PQ49A33 203 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 C20orf173Q96LM9 149 aa4.9□□□□□ -1.63
RIPK1-202ENST00000380409 ANKRD17O75179 2603 aaKnown RBP4.89□□□□□ -1.63
RIPK1-202ENST00000380409 IGHV1-69DA0A0B4J2H0 117 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms