RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 P0DMU3 169 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 EMP1P54849 157 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 KIR2DL4Q99706 377 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 NAA38Q9BRA0 125 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 CHAC1Q9BUX1 264 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 MRPL16Q9NX20 251 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 Q9UF83 564 aa5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 FASNP49327 2511 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-204ENST00000380176 JMJD1CQ15652 2540 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 TRAV2A0A0B4J234 112 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 FXYD2P54710 66 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 RAB37Q96AX2 223 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 IGLV4-69A0A075B6H9 119 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 GCSHP23434 173 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 ODF3L2Q3SX64 289 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 OPRPNQ99935 248 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 NOTCH3Q9UM47 2321 aa5.81□□□□□ -1.48
PDLIM5-204ENST00000380176 J3QKU1 62 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 CCL24O00175 119 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 A6NDN8 102 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 C11orf86A6NJI1 115 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 Q6ZSN1 163 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 TRPT1Q86TN4 253 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 LINC01006Q8NI28 216 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 GTSF1LQ9H1H1 148 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 GCN1Q92616 2671 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 H3BRM9 83 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 RS1O15537 224 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 SERTAD4-AS1Q5TG53 156 aa5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 ZNF418Q8TF45 676 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 SPAG8Q99932 426 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-204ENST00000380176 H3BUT2 72 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 GYPEP15421 78 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 UFSP1Q6NVU6 142 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 LINC01587Q99440 93 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 SMR3AQ99954 134 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 XCL2Q9UBD3 114 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 C9orf118A6NHY6 69 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 K7ERJ3 54 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 PMVKQ15126 192 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 TEX29Q8N6K0 151 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 C11orf72Q8NBR9 251 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 PRADC1Q9BSG0 188 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 PPDPFQ9H3Y8 114 aa5.79□□□□□ -1.48
PDLIM5-204ENST00000380176 E9PLD3 99 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 M0R2P5 195 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 CEND1Q8N111 149 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 ZNRF2Q8NHG8 242 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 TIMM17AQ99595 171 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 MYMXA0A1B0GTQ4 84 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 I3L3M4 83 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 NSUN5P1Q3KNT7 163 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 HECTD1Q9ULT8 2610 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 ZNF415Q09FC8 603 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 CFAP126Q5VTH2 177 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 C20orf203Q8NBC4 194 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 TM2D2Q9BX73 214 aa5.78□□□□□ -1.48
PDLIM5-204ENST00000380176 F5H768 121 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 INSP01308 110 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 SMIM13P0DJ93 91 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 RHOHQ15669 191 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 STHQ8IWL8 128 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 C1orf158Q8N1D5 194 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 KIR2DL5BQ8NHK3 375 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 PHLDA1Q8WV24 401 aaPredicted RBP5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 PLEKHB2Q96CS7 222 aa5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 NHP2Q9NX24 153 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-204ENST00000380176 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 LINC01549A6NIU2 74 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 A8MWV9 139 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 RNF183Q96D59 192 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 HIST1H4GQ99525 98 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 WFDC10AQ9H1F0 79 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 C16orf95Q9H693 158 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 CEMP1Q6PRD7 247 aaPredicted RBP5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 EDA2RQ9HAV5 297 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 HIVEP2P31629 2446 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 ZNF815PA8K554 130 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 TMEM170BQ5T4T1 132 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 LINC00467Q9BRT7 94 aa5.76□□□□□ -1.49
PDLIM5-204ENST00000380176 A0A1W2PPM0 123 aa5.75□□□□□ -1.49
PDLIM5-204ENST00000380176 B5MCH6 92 aa5.75□□□□□ -1.49
PDLIM5-204ENST00000380176 IGLV4-3A0A075B6K6 122 aa5.75□□□□□ -1.49
PDLIM5-204ENST00000380176 IGHV3-38A0A0C4DH36 116 aa5.75□□□□□ -1.49
PDLIM5-204ENST00000380176 BEAN1Q3B7T3 259 aa5.75□□□□□ -1.49
PDLIM5-204ENST00000380176 NOTCH2Q04721 2471 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 TAL2Q16559 108 aa5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
PDLIM5-204ENST00000380176 OTOGQ6ZRI0 2925 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms