RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 IGLV4-60A0A075B6I1 120 aa15.48■□□□□ 0.07
CDKN2A-203ENST00000380151 IGLV10-54A0A075B6I4 117 aa15.48■□□□□ 0.07
CDKN2A-203ENST00000380151 COTL1Q14019 142 aa15.48■□□□□ 0.07
CDKN2A-203ENST00000380151 GATD1Q8NB37 220 aa15.48■□□□□ 0.07
CDKN2A-203ENST00000380151 AMTP48728 403 aa15.47■□□□□ 0.07
CDKN2A-203ENST00000380151 CHAC1Q9BUX1 264 aa15.47■□□□□ 0.07
CDKN2A-203ENST00000380151 GFRA4Q9GZZ7 299 aa15.47■□□□□ 0.07
CDKN2A-203ENST00000380151 DMBT1Q9UGM3 2413 aaPredicted RBP15.46■□□□□ 0.07
CDKN2A-203ENST00000380151 PRSS1P07477 247 aa15.46■□□□□ 0.07
CDKN2A-203ENST00000380151 FOXA3P55318 350 aaPredicted RBP15.46■□□□□ 0.07
CDKN2A-203ENST00000380151 FAM231DQ6ZW35 169 aa15.46■□□□□ 0.07
CDKN2A-203ENST00000380151 UBE2L6O14933 153 aa15.45■□□□□ 0.06
CDKN2A-203ENST00000380151 PLA2G1BP04054 148 aaKnown RBP15.45■□□□□ 0.06
CDKN2A-203ENST00000380151 SMIM15Q7Z3B0 74 aa15.45■□□□□ 0.06
CDKN2A-203ENST00000380151 RPL39LQ96EH5 51 aaKnown RBP15.45■□□□□ 0.06
CDKN2A-203ENST00000380151 EIF5A2Q9GZV4 153 aaKnown RBP15.45■□□□□ 0.06
CDKN2A-203ENST00000380151 A0A1B0GUV1 79 aa15.44■□□□□ 0.06
CDKN2A-203ENST00000380151 A8MWL6 223 aa15.44■□□□□ 0.06
CDKN2A-203ENST00000380151 SMIM7Q9BQ49 75 aa15.44■□□□□ 0.06
CDKN2A-203ENST00000380151 CIRBP-AS1Q8TBR5 109 aa15.43■□□□□ 0.06
CDKN2A-203ENST00000380151 A0A1B0GVG6 124 aa15.42■□□□□ 0.06
CDKN2A-203ENST00000380151 CT83Q5H943 113 aa15.41■□□□□ 0.06
CDKN2A-203ENST00000380151 LINC01551Q86U37 167 aa15.41■□□□□ 0.06
CDKN2A-203ENST00000380151 FAM210AQ96ND0 272 aa15.41■□□□□ 0.06
CDKN2A-203ENST00000380151 TRAV8-4A0A0B4J246 113 aa15.4■□□□□ 0.06
CDKN2A-203ENST00000380151 ZNF727A8MUV8 499 aa15.38■□□□□ 0.05
CDKN2A-203ENST00000380151 DGAT2L7PQ6IED9 249 aa15.38■□□□□ 0.05
CDKN2A-203ENST00000380151 BORCS7Q96B45 105 aa15.38■□□□□ 0.05
CDKN2A-203ENST00000380151 SDHAF1A6NFY7 115 aa15.37■□□□□ 0.05
CDKN2A-203ENST00000380151 NDUFS6O75380 124 aaKnown RBP15.37■□□□□ 0.05
CDKN2A-203ENST00000380151 SRP19P09132 144 aaKnown RBP15.37■□□□□ 0.05
CDKN2A-203ENST00000380151 TEX261Q6UWH6 196 aa15.37■□□□□ 0.05
CDKN2A-203ENST00000380151 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 IGKV2-29A2NJV5 120 aaPredicted RBP15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 HIGD1CA8MV81 97 aa15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 APCSP02743 223 aa15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 C9orf163Q8N9P6 203 aa15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 CLRN3Q8NCR9 226 aa15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 TSKUQ8WUA8 353 aa15.36■□□□□ 0.05
CDKN2A-203ENST00000380151 IGKV3OR2-268A0A0C4DH90 116 aa15.35■□□□□ 0.05
CDKN2A-203ENST00000380151 hDV102S1A0JD36 115 aa15.35■□□□□ 0.05
CDKN2A-203ENST00000380151 NCR2O95944 276 aa15.35■□□□□ 0.05
CDKN2A-203ENST00000380151 A0A1B0GUT8 65 aa15.34■□□□□ 0.05
CDKN2A-203ENST00000380151 GAS8-AS1O95177 125 aa15.34■□□□□ 0.05
CDKN2A-203ENST00000380151 AMMECR1LQ6DCA0 310 aa15.34■□□□□ 0.05
CDKN2A-203ENST00000380151 OSTCQ9NRP0 149 aa15.34■□□□□ 0.05
CDKN2A-203ENST00000380151 RNASEKQ6P5S7 137 aaKnown RBP15.33■□□□□ 0.04
CDKN2A-203ENST00000380151 KRTAP10-4P60372 401 aaPredicted RBP15.32■□□□□ 0.04
CDKN2A-203ENST00000380151 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.32■□□□□ 0.04
CDKN2A-203ENST00000380151 TRBV6-5A0A0K0K1A5 114 aa15.31■□□□□ 0.04
CDKN2A-203ENST00000380151 GAGE12HA6NDE8 117 aa15.31■□□□□ 0.04
CDKN2A-203ENST00000380151 FGF6P10767 208 aa15.31■□□□□ 0.04
CDKN2A-203ENST00000380151 CNBPP62633 177 aaKnown RBP15.31■□□□□ 0.04
CDKN2A-203ENST00000380151 TMEM191AQ9H0A3 160 aa15.31■□□□□ 0.04
CDKN2A-203ENST00000380151 PANO1I0J062 215 aa15.3■□□□□ 0.04
CDKN2A-203ENST00000380151 I3L3M4 83 aa15.3■□□□□ 0.04
CDKN2A-203ENST00000380151 PMCHP20382 165 aa15.3■□□□□ 0.04
CDKN2A-203ENST00000380151 RNF185Q96GF1 192 aa15.3■□□□□ 0.04
CDKN2A-203ENST00000380151 V9GYV3 84 aa15.3■□□□□ 0.04
CDKN2A-203ENST00000380151 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 H7C423 109 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 J3QL48 77 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 SDIM1Q6ZPB5 146 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 AMN1Q8IY45 258 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 ISOC2Q96AB3 205 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 ST20Q9HBF5 79 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 AP5S1Q9NUS5 200 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 TMEM242Q9NWH2 141 aa15.29■□□□□ 0.04
CDKN2A-203ENST00000380151 RPS10P46783 165 aaKnown RBP15.28■□□□□ 0.04
CDKN2A-203ENST00000380151 C9JQL5 133 aa15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 TSHBP01222 138 aa15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 SLPIP03973 132 aa15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 RAB4AP20338 218 aa15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 C15orf56Q8N910 161 aa15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 CHCHD10Q8WYQ3 142 aaPredicted RBP15.27■□□□□ 0.04
CDKN2A-203ENST00000380151 RPL23P62829 140 aaKnown RBP15.26■□□□□ 0.03
CDKN2A-203ENST00000380151 TMEM241Q24JQ0 296 aa15.26■□□□□ 0.03
CDKN2A-203ENST00000380151 NUP35Q8NFH5 326 aa15.26■□□□□ 0.03
CDKN2A-203ENST00000380151 MRAP2Q96G30 205 aa15.26■□□□□ 0.03
CDKN2A-203ENST00000380151 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.25■□□□□ 0.03
CDKN2A-203ENST00000380151 ZNF25P17030 456 aaPredicted RBP15.25■□□□□ 0.03
CDKN2A-203ENST00000380151 RIGQ13278 110 aa15.25■□□□□ 0.03
CDKN2A-203ENST00000380151 ADIRFQ15847 76 aa15.25■□□□□ 0.03
CDKN2A-203ENST00000380151 FAM74A3Q4VXF1 159 aa15.25■□□□□ 0.03
CDKN2A-203ENST00000380151 IGHV3-64A0A075B6Q5 118 aa15.24■□□□□ 0.03
CDKN2A-203ENST00000380151 SMKR1H3BMG3 65 aa15.24■□□□□ 0.03
CDKN2A-203ENST00000380151 ESDP10768 282 aa15.24■□□□□ 0.03
CDKN2A-203ENST00000380151 RPL37AP61513 92 aaKnown RBP15.24■□□□□ 0.03
CDKN2A-203ENST00000380151 SRSF3P84103 164 aaKnown RBP15.23■□□□□ 0.03
CDKN2A-203ENST00000380151 HIGD2BQ4VC39 106 aa15.23■□□□□ 0.03
CDKN2A-203ENST00000380151 CFAP161Q6P656 301 aa15.23■□□□□ 0.03
CDKN2A-203ENST00000380151 BTF3L4Q96K17 158 aa15.23■□□□□ 0.03
CDKN2A-203ENST00000380151 KRTAP29-1A8MX34 341 aaPredicted RBP15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 POLR2KP53803 58 aaKnown RBP15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 OR5A1Q8NGJ0 315 aa15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 TMEM101Q96IK0 257 aa15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 NAT8Q9UHE5 227 aa15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 NAT8BQ9UHF3 227 aa15.22■□□□□ 0.03
CDKN2A-203ENST00000380151 TRBV27A0A0K0K1C4 114 aa15.21■□□□□ 0.03
CDKN2A-203ENST00000380151 CHTF8P0CG12 524 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms