RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 LINC00846Q9NV44 126 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 PTPRQQ9UMZ3 2332 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 POLEQ07864 2286 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1BA6NDE4 496 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1EA6NEQ0 496 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 NXPH4O95158 308 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1DP0C7P1 496 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1A1P0DJD3 496 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1CP0DJD4 496 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 GRNP28799 593 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 HILS1P60008 231 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 RBMY1FQ15415 496 aaKnown RBP5.51□□□□□ -1.53
CDKL5-201ENST00000379989 CEP250Q9BV73 2442 aa5.51□□□□□ -1.53
CDKL5-201ENST00000379989 LMO4P61968 165 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 GPHB5Q86YW7 130 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 Q8N2B8 174 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 IGLV11-55A0A075B6I3 123 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 TMEM89A2RUT3 159 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 FAM222AQ5U5X8 452 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 Q96MF0 132 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 FANCD2OSQ96PS1 177 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-201ENST00000379989 KALRNO60229 2985 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 K7EIM0 57 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 M0R381 172 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 SMAD5-AS1Q9Y6J3 95 aa5.5□□□□□ -1.53
CDKL5-201ENST00000379989 MGPP08493 103 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 IGHV3-30-3P0DP02 117 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 COX7A1P24310 79 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
CDKL5-201ENST00000379989 MRPL53Q96EL3 112 aaKnown RBP5.49□□□□□ -1.53
CDKL5-201ENST00000379989 DNAL4O96015 105 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 GNLYP22749 145 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 APC2O95996 2303 aa5.49□□□□□ -1.53
CDKL5-201ENST00000379989 MRPS36P82909 103 aaKnown RBP5.49□□□□□ -1.53
CDKL5-201ENST00000379989 RIF1Q5UIP0 2472 aaKnown RBP5.49□□□□□ -1.53
CDKL5-201ENST00000379989 IGHV3-72A0A0B4J1Y9 119 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 CCKP06307 115 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
CDKL5-201ENST00000379989 FAM218AQ96MZ4 157 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 CCL19Q99731 98 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 S4R3C0 116 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 ACACAQ13085 2346 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 TRAV23DV6A0A075B6W5 121 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 TRBV12-3P01733 135 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 NDPQ00604 133 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 ZFAND3Q9H8U3 227 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 MOB4Q9Y3A3 225 aa5.48□□□□□ -1.53
CDKL5-201ENST00000379989 TRBV7-6A0A0J9YX20 115 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 C9orf47Q6ZRZ4 202 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 ZFHX2Q9C0A1 2572 aaPredicted RBP5.47□□□□□ -1.53
CDKL5-201ENST00000379989 LYNX1G3V0Z9 82 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 TIMM17BO60830 172 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 LYNX1P0DP58 116 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 C14orf132Q9NPU4 83 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 ZFHX3Q15911 3703 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 ICE1Q9Y2F5 2266 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 IGHV1-69P01742 117 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 POLR2KP53803 58 aaKnown RBP5.47□□□□□ -1.53
CDKL5-201ENST00000379989 USMG5Q96IX5 58 aa5.47□□□□□ -1.53
CDKL5-201ENST00000379989 B4DSR2 109 aa5.46□□□□□ -1.53
CDKL5-201ENST00000379989 ZNF561-AS1K7EIQ3 104 aa5.46□□□□□ -1.53
CDKL5-201ENST00000379989 Q8N9W7 124 aa5.46□□□□□ -1.53
CDKL5-201ENST00000379989 NDUFA12Q9UI09 145 aa5.46□□□□□ -1.53
CDKL5-201ENST00000379989 TRBV27A0A0K0K1C4 114 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 IGF1P05019 195 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 WFDC9Q8NEX5 89 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 BPESC1Q9GZL8 116 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 Q9HAA7 133 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 MUC4Q99102 2169 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 PPP1R17O96001 155 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 VSIG2Q96IQ7 327 aa5.46□□□□□ -1.54
CDKL5-201ENST00000379989 IGHV7-81A0A0B4J1V7 117 aa5.45□□□□□ -1.54
CDKL5-201ENST00000379989 A8MZ25 164 aa5.45□□□□□ -1.54
CDKL5-201ENST00000379989 ZFP36P26651 326 aaKnown RBP5.45□□□□□ -1.54
CDKL5-201ENST00000379989 RBM3P98179 157 aaKnown RBP5.45□□□□□ -1.54
CDKL5-201ENST00000379989 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
CDKL5-201ENST00000379989 PRR9Q5T870 116 aa5.45□□□□□ -1.54
CDKL5-201ENST00000379989 SNRPD3P62318 126 aaKnown RBP5.44□□□□□ -1.54
CDKL5-201ENST00000379989 CD164Q04900 197 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 C19orf54Q5BKX5 351 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 LENEPQ9Y5L5 61 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 PTPRZ1P23471 2315 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-201ENST00000379989 F8WEM9 126 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 MSMBP08118 114 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 SAA4P35542 130 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 FAM229BQ4G0N7 80 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 C1orf158Q8N1D5 194 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 IGHV4OR15-8A0A075B7B6 117 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 A0A087WW49 117 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 VCYO14598 125 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 LINC00315P59091 139 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 C5orf56Q8N8D9 126 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 RMI2Q96E14 147 aa5.44□□□□□ -1.54
CDKL5-201ENST00000379989 ANKHD1Q8IWZ3 2542 aaKnown RBP5.44□□□□□ -1.54
CDKL5-201ENST00000379989 ANKRD11Q6UB99 2663 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms