RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 NHP2Q9NX24 153 aaKnown RBP10.92□□□□□ -0.66
PRNP-201ENST00000379440 HHLA3Q9XRX5 114 aa10.92□□□□□ -0.66
PRNP-201ENST00000379440 FASNP49327 2511 aaKnown RBP10.92□□□□□ -0.66
PRNP-201ENST00000379440 NFE4Q86UQ8 179 aa10.92□□□□□ -0.66
PRNP-201ENST00000379440 TRAV2A0A0B4J234 112 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 CCL24O00175 119 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 PPDPFLQ8WWR9 84 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 SNCGO76070 127 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 CRYGDP07320 174 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 NMUP48645 174 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 PCP2Q8IVA1 136 aa10.91□□□□□ -0.66
PRNP-201ENST00000379440 MRPL35Q9NZE8 188 aaKnown RBP10.91□□□□□ -0.66
PRNP-201ENST00000379440 ZNF256Q9Y2P7 627 aaPredicted RBP10.91□□□□□ -0.66
PRNP-201ENST00000379440 PPP1R17O96001 155 aa10.9□□□□□ -0.66
PRNP-201ENST00000379440 IGKCP01834 107 aa10.9□□□□□ -0.66
PRNP-201ENST00000379440 RNASE1P07998 156 aaKnown RBP10.9□□□□□ -0.66
PRNP-201ENST00000379440 TOMM6Q96B49 74 aa10.9□□□□□ -0.66
PRNP-201ENST00000379440 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
PRNP-201ENST00000379440 GCN1Q92616 2671 aaKnown RBP10.9□□□□□ -0.66
PRNP-201ENST00000379440 A8MTW9 85 aa10.9□□□□□ -0.67
PRNP-201ENST00000379440 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.67
PRNP-201ENST00000379440 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.67
PRNP-201ENST00000379440 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
PRNP-201ENST00000379440 ZNF56Q15929 161 aa10.89□□□□□ -0.67
PRNP-201ENST00000379440 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
PRNP-201ENST00000379440 DPM2O94777 84 aa10.89□□□□□ -0.67
PRNP-201ENST00000379440 POLR2KP53803 58 aaKnown RBP10.89□□□□□ -0.67
PRNP-201ENST00000379440 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
PRNP-201ENST00000379440 F5H768 121 aa10.88□□□□□ -0.67
PRNP-201ENST00000379440 LINC00694P0DN24 101 aa10.88□□□□□ -0.67
PRNP-201ENST00000379440 FAM19A5Q7Z5A7 132 aaPredicted RBP10.88□□□□□ -0.67
PRNP-201ENST00000379440 GTSCR1Q86UQ5 136 aa10.88□□□□□ -0.67
PRNP-201ENST00000379440 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
PRNP-201ENST00000379440 MORN3Q6PF18 240 aaPredicted RBP10.88□□□□□ -0.67
PRNP-201ENST00000379440 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
PRNP-201ENST00000379440 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 K7EMI3 77 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 SDHAF1A6NFY7 115 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 M0QY20 66 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 ODF3L2Q3SX64 289 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 Q6Q795 121 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 C16orf95Q9H693 158 aa10.87□□□□□ -0.67
PRNP-201ENST00000379440 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
PRNP-201ENST00000379440 CFAP126Q5VTH2 177 aa10.86□□□□□ -0.67
PRNP-201ENST00000379440 IGHV3-73A0A0B4J1V6 119 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 VCYO14598 125 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 ZFP2Q6ZN57 461 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 CEND1Q8N111 149 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 J3KT08 172 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 MRPL23Q16540 153 aaKnown RBP10.85□□□□□ -0.67
PRNP-201ENST00000379440 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
PRNP-201ENST00000379440 NIPBLQ6KC79 2804 aaeCLIP10.85□□□□□ -0.67
PRNP-201ENST00000379440 C9JAW5 83 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 HILS1P60008 231 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 BAALCQ8WXS3 180 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 LINC01587Q99440 93 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 PROK1P58294 105 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 RPL39P62891 51 aaKnown RBP10.84□□□□□ -0.67
PRNP-201ENST00000379440 RRN3P1Q2M238 152 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 MRAPQ8TCY5 172 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 CARD19Q96LW7 228 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 TP53TG1Q9Y2A0 90 aa10.84□□□□□ -0.67
PRNP-201ENST00000379440 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 TRBV6-5A0A0K0K1A5 114 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 H7C1H1 209 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 XCL2Q9UBD3 114 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 F8VRH5 84 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 SMCPP49901 116 aaPredicted RBP10.83□□□□□ -0.68
PRNP-201ENST00000379440 C12orf74Q32Q52 190 aa10.83□□□□□ -0.68
PRNP-201ENST00000379440 TSHBP01222 138 aa10.82□□□□□ -0.68
PRNP-201ENST00000379440 C3orf56Q8N813 242 aa10.82□□□□□ -0.68
PRNP-201ENST00000379440 EMP1P54849 157 aa10.82□□□□□ -0.68
PRNP-201ENST00000379440 HIVEP2P31629 2446 aa10.82□□□□□ -0.68
PRNP-201ENST00000379440 P0DMU3 169 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 FAM231AP0DMU4 169 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 FAM231CP0DMU5 169 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 PLNP26678 52 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
PRNP-201ENST00000379440 STHQ8IWL8 128 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 NSUN5P1Q3KNT7 163 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 NOTCH2Q04721 2471 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 INSP01308 110 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
PRNP-201ENST00000379440 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 IGIPA6NJ69 53 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 M0R2P5 195 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 LY6G6DO95868 133 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 SEC61GP60059 68 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 ZNF415Q09FC8 603 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 MAPKAPK5-AS1Q8N8E1 139 aa10.8□□□□□ -0.68
PRNP-201ENST00000379440 SETXQ7Z333 2677 aaKnown RBP10.79□□□□□ -0.68
PRNP-201ENST00000379440 Q9UF83 564 aa10.79□□□□□ -0.68
PRNP-201ENST00000379440 Q6ZSN1 163 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms