RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
PDLIM4-202ENST00000379018 IGHV1-24A0A0C4DH33 117 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 C9JQL5 133 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 MGPP08493 103 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 RHEBQ15382 184 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 MAP1LC3BQ9GZQ8 125 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 VAX2Q9UIW0 290 aa11.24□□□□□ -0.61
PDLIM4-202ENST00000379018 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
PDLIM4-202ENST00000379018 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
PDLIM4-202ENST00000379018 IFNA1P01562 189 aa11.22□□□□□ -0.61
PDLIM4-202ENST00000379018 BCL2P10415 239 aa11.22□□□□□ -0.61
PDLIM4-202ENST00000379018 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
PDLIM4-202ENST00000379018 C20orf203Q8NBC4 194 aa11.22□□□□□ -0.61
PDLIM4-202ENST00000379018 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
PDLIM4-202ENST00000379018 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 SRP19P09132 144 aaKnown RBP11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 COX6A2Q02221 97 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 PLAC8Q9NZF1 115 aa11.21□□□□□ -0.61
PDLIM4-202ENST00000379018 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 SNAI2O43623 268 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 P01737 135 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 LINC01600Q96MT4 127 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 TPPP3Q9BW30 176 aa11.2□□□□□ -0.62
PDLIM4-202ENST00000379018 A0A1B0GV50 99 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 TMEM250H0YL14 139 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 PAGE4O60829 102 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 CCL20P78556 96 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 WDR73Q6P4I2 378 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 SMCO4Q9NRQ5 59 aa11.19□□□□□ -0.62
PDLIM4-202ENST00000379018 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
PDLIM4-202ENST00000379018 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
PDLIM4-202ENST00000379018 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
PDLIM4-202ENST00000379018 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 UBE2L6O14933 153 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 CXCL1P09341 107 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 SUMO4Q6EEV6 95 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 BAGE2Q86Y30 109 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 TCEAL7Q9BRU2 100 aa11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
PDLIM4-202ENST00000379018 LOC105371267A0A1B0GV96 52 aa11.16□□□□□ -0.62
PDLIM4-202ENST00000379018 STPG4Q8N801 248 aa11.16□□□□□ -0.62
PDLIM4-202ENST00000379018 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
PDLIM4-202ENST00000379018 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
PDLIM4-202ENST00000379018 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
PDLIM4-202ENST00000379018 H7C1H1 209 aa11.15□□□□□ -0.62
PDLIM4-202ENST00000379018 M0QY20 66 aa11.15□□□□□ -0.62
PDLIM4-202ENST00000379018 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
PDLIM4-202ENST00000379018 GZMBP10144 247 aa11.15□□□□□ -0.62
PDLIM4-202ENST00000379018 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
PDLIM4-202ENST00000379018 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
PDLIM4-202ENST00000379018 RPS10P46783 165 aaKnown RBP11.14□□□□□ -0.63
PDLIM4-202ENST00000379018 MEF2BQ02080 365 aaPredicted RBP11.14□□□□□ -0.63
PDLIM4-202ENST00000379018 A0A1B0GUV1 79 aa11.13□□□□□ -0.63
PDLIM4-202ENST00000379018 S100A9P06702 114 aaKnown RBP11.13□□□□□ -0.63
PDLIM4-202ENST00000379018 CFAP161Q6P656 301 aa11.13□□□□□ -0.63
PDLIM4-202ENST00000379018 CBLN2Q8IUK8 224 aa11.13□□□□□ -0.63
PDLIM4-202ENST00000379018 GNG13Q9P2W3 67 aa11.13□□□□□ -0.63
PDLIM4-202ENST00000379018 COLCA2A8K830 154 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 AMTP48728 403 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
PDLIM4-202ENST00000379018 A0A096LNI7 61 aa11.11□□□□□ -0.63
PDLIM4-202ENST00000379018 PDE6DO43924 150 aa11.11□□□□□ -0.63
PDLIM4-202ENST00000379018 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
PDLIM4-202ENST00000379018 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
PDLIM4-202ENST00000379018 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
PDLIM4-202ENST00000379018 COTL1Q14019 142 aa11.09□□□□□ -0.63
PDLIM4-202ENST00000379018 RPS10P5Q9NQ39 176 aa11.09□□□□□ -0.63
PDLIM4-202ENST00000379018 KRTAP10-8P60410 259 aa11.08□□□□□ -0.64
PDLIM4-202ENST00000379018 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
PDLIM4-202ENST00000379018 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
PDLIM4-202ENST00000379018 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
PDLIM4-202ENST00000379018 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
PDLIM4-202ENST00000379018 RPL35P42766 123 aaKnown RBP11.07□□□□□ -0.64
PDLIM4-202ENST00000379018 AMMECR1LQ6DCA0 310 aa11.07□□□□□ -0.64
PDLIM4-202ENST00000379018 C11orf52Q96A22 123 aa11.07□□□□□ -0.64
PDLIM4-202ENST00000379018 PGLYRP4Q96LB8 373 aa11.07□□□□□ -0.64
PDLIM4-202ENST00000379018 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
PDLIM4-202ENST00000379018 CACNG7P62955 275 aa11.06□□□□□ -0.64
PDLIM4-202ENST00000379018 RNASEKQ6P5S7 137 aaKnown RBP11.06□□□□□ -0.64
PDLIM4-202ENST00000379018 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
PDLIM4-202ENST00000379018 NIT2Q9NQR4 276 aa11.06□□□□□ -0.64
PDLIM4-202ENST00000379018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.04□□□□□ -0.64
PDLIM4-202ENST00000379018 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
PDLIM4-202ENST00000379018 IGKV2-29A2NJV5 120 aaPredicted RBP11.04□□□□□ -0.64
PDLIM4-202ENST00000379018 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms