RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 IGF2BP2-AS1Q96M15 143 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 RPP21Q9H633 154 aaKnown RBP8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 ZNF815PA8K554 130 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 CRYGAP11844 174 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 UBE2D3P61077 147 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 UBE2D2P62837 147 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 DEFB121Q5J5C9 76 aa8.22□□□□□ -1.09
PCDHGA1-201ENST00000378105 FMC1Q96HJ9 113 aa8.21□□□□□ -1.09
PCDHGA1-201ENST00000378105 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 MRPL53Q96EL3 112 aaKnown RBP8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGKV3D-7A0A0C4DH55 119 aa8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 RPL13AP40429 203 aaKnown RBP8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 BRWD1-AS2P59051 145 aa8.21□□□□□ -1.1
PCDHGA1-201ENST00000378105 HLA-DMBP28068 263 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 NPC2P61916 151 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 PRSS2P07478 247 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 NDUFA11Q86Y39 141 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 SOSTDC1Q6X4U4 206 aa8.2□□□□□ -1.1
PCDHGA1-201ENST00000378105 TRGV2A0A075B6R0 118 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 LINC01620Q4KN68 170 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGHV4-31P0DP07 118 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 PRKDCP78527 4128 aaKnown RBP8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 LY6G5BQ8NDX9 201 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 INAFM1C9JVW0 142 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 LINC01619G3V211 115 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGLV2-23P01705 113 aa8.19□□□□□ -1.1
PCDHGA1-201ENST00000378105 ORMDL2Q53FV1 153 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 SMCR5Q8TEV8 140 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 SMR3AQ99954 134 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 TRAV8-3A0A0A6YYJ7 113 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 K7EIM0 57 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 LGALS1P09382 135 aaKnown RBP8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 EBI3Q14213 229 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 C9orf139Q6ZV77 190 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 DAZ4Q86SG3 579 aaKnown RBP8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 FHL2Q14192 279 aa8.18□□□□□ -1.1
PCDHGA1-201ENST00000378105 TRBV7-7A0A0K0K1E9 115 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 PAX4O43316 350 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 GAS8-AS1O95177 125 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGKV1-17P01599 117 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 SLURP1P55000 103 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 CT83Q5H943 113 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 PIFOQ8TCI5 191 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 XCL2Q9UBD3 114 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 CFC1P0CG37 223 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 NPBQ8NG41 125 aa8.17□□□□□ -1.1
PCDHGA1-201ENST00000378105 TRAV21A0A0B4J279 112 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 F6UB75 175 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 LY6LH3BQJ8 138 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGHV3-73A0A0B4J1V6 119 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 CLEC2BQ92478 149 aa8.16□□□□□ -1.1
PCDHGA1-201ENST00000378105 IGKV1OR2-108A0A075B7D4 117 aa8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 GATA1P15976 413 aaPredicted RBP8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 SBSPONQ8IVN8 264 aa8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 MRPL55Q7Z7F7 128 aaKnown RBP8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 SLC25A2Q9BXI2 301 aa8.15□□□□□ -1.1
PCDHGA1-201ENST00000378105 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 IGHV3-53P01767 116 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRR20EP86478 221 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRR20CP86479 221 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRR20DP86480 221 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRR20BP86481 221 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRR20AP86496 221 aa8.15□□□□□ -1.11
PCDHGA1-201ENST00000378105 IGLV11-55A0A075B6I3 123 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 NDUFA4O00483 81 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 NDUFC2O95298 119 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 TRBV12-3P01733 135 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 TRBV19A0A075B6N1 114 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 H3BT86 120 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 I3L2K1 104 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 CCL24O00175 119 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 CTSGP08311 255 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 ITPR2Q14571 2701 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 C10orf99Q6UWK7 81 aa8.14□□□□□ -1.11
PCDHGA1-201ENST00000378105 PRSS46E5RG02 174 aa8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 TIMM17BO60830 172 aa8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 Q6ZS46 218 aa8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 ORMDL3Q8N138 153 aa8.13□□□□□ -1.11
PCDHGA1-201ENST00000378105 LINC00574Q9H8X3 128 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms