RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
COMMD6-202ENST00000377612 C14orf177Q52M58 125 aa11.55□□□□□ -0.56
COMMD6-202ENST00000377612 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
COMMD6-202ENST00000377612 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
COMMD6-202ENST00000377612 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
COMMD6-202ENST00000377612 NIT2Q9NQR4 276 aa11.55□□□□□ -0.56
COMMD6-202ENST00000377612 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
COMMD6-202ENST00000377612 REG3AQ06141 175 aa11.54□□□□□ -0.56
COMMD6-202ENST00000377612 TWIST1Q15672 202 aa11.54□□□□□ -0.56
COMMD6-202ENST00000377612 RPL39LQ96EH5 51 aaKnown RBP11.54□□□□□ -0.56
COMMD6-202ENST00000377612 TMEM250H0YL14 139 aa11.53□□□□□ -0.56
COMMD6-202ENST00000377612 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
COMMD6-202ENST00000377612 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
COMMD6-202ENST00000377612 PANO1I0J062 215 aa11.51□□□□□ -0.57
COMMD6-202ENST00000377612 AMTP48728 403 aa11.51□□□□□ -0.57
COMMD6-202ENST00000377612 BLOC1S1P78537 153 aa11.51□□□□□ -0.57
COMMD6-202ENST00000377612 FAM231DQ6ZW35 169 aa11.51□□□□□ -0.57
COMMD6-202ENST00000377612 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
COMMD6-202ENST00000377612 COTL1Q14019 142 aa11.5□□□□□ -0.57
COMMD6-202ENST00000377612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.5□□□□□ -0.57
COMMD6-202ENST00000377612 A0A1B0GVG6 124 aa11.49□□□□□ -0.57
COMMD6-202ENST00000377612 GAS8-AS1O95177 125 aa11.49□□□□□ -0.57
COMMD6-202ENST00000377612 CEBPGP53567 150 aa11.49□□□□□ -0.57
COMMD6-202ENST00000377612 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
COMMD6-202ENST00000377612 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
COMMD6-202ENST00000377612 SLPIP03973 132 aa11.46□□□□□ -0.57
COMMD6-202ENST00000377612 CT83Q5H943 113 aa11.46□□□□□ -0.57
COMMD6-202ENST00000377612 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
COMMD6-202ENST00000377612 FAM210AQ96ND0 272 aa11.46□□□□□ -0.57
COMMD6-202ENST00000377612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.45□□□□□ -0.58
COMMD6-202ENST00000377612 TRAV8-4A0A0B4J246 113 aa11.45□□□□□ -0.58
COMMD6-202ENST00000377612 IGKV2-29A2NJV5 120 aaPredicted RBP11.45□□□□□ -0.58
COMMD6-202ENST00000377612 UBE2L6O14933 153 aa11.45□□□□□ -0.58
COMMD6-202ENST00000377612 SRP19P09132 144 aaKnown RBP11.45□□□□□ -0.58
COMMD6-202ENST00000377612 C15orf56Q8N910 161 aa11.45□□□□□ -0.58
COMMD6-202ENST00000377612 SMIM7Q9BQ49 75 aa11.45□□□□□ -0.58
COMMD6-202ENST00000377612 hDV102S1A0JD36 115 aa11.44□□□□□ -0.58
COMMD6-202ENST00000377612 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
COMMD6-202ENST00000377612 A8MWL6 223 aa11.44□□□□□ -0.58
COMMD6-202ENST00000377612 KRTAP29-1A8MX34 341 aaPredicted RBP11.44□□□□□ -0.58
COMMD6-202ENST00000377612 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
COMMD6-202ENST00000377612 SDIM1Q6ZPB5 146 aa11.44□□□□□ -0.58
COMMD6-202ENST00000377612 HMCN2Q8NDA2 5059 aa11.44□□□□□ -0.58
COMMD6-202ENST00000377612 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
COMMD6-202ENST00000377612 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
COMMD6-202ENST00000377612 EIF5A2Q9GZV4 153 aaKnown RBP11.43□□□□□ -0.58
COMMD6-202ENST00000377612 IGKV3OR2-268A0A0C4DH90 116 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 FAM231BA6NCW3 169 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 NDUFS6O75380 124 aaKnown RBP11.42□□□□□ -0.58
COMMD6-202ENST00000377612 NCR2O95944 276 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 APCSP02743 223 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
COMMD6-202ENST00000377612 CIRBPQ14011 172 aaKnown RBP11.42□□□□□ -0.58
COMMD6-202ENST00000377612 CLRN3Q8NCR9 226 aa11.42□□□□□ -0.58
COMMD6-202ENST00000377612 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 J3QL48 77 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 TSHBP01222 138 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 SMIM15Q7Z3B0 74 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 TSKUQ8WUA8 353 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 V9GYV3 84 aa11.41□□□□□ -0.58
COMMD6-202ENST00000377612 CHTF8P0CG12 524 aa11.4□□□□□ -0.58
COMMD6-202ENST00000377612 FGF6P10767 208 aa11.4□□□□□ -0.58
COMMD6-202ENST00000377612 OSTCQ9NRP0 149 aa11.4□□□□□ -0.58
COMMD6-202ENST00000377612 C9JQL5 133 aa11.39□□□□□ -0.59
COMMD6-202ENST00000377612 ESDP10768 282 aa11.39□□□□□ -0.59
COMMD6-202ENST00000377612 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
COMMD6-202ENST00000377612 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
COMMD6-202ENST00000377612 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
COMMD6-202ENST00000377612 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
COMMD6-202ENST00000377612 AMMECR1LQ6DCA0 310 aa11.38□□□□□ -0.59
COMMD6-202ENST00000377612 RNASEKQ6P5S7 137 aaKnown RBP11.38□□□□□ -0.59
COMMD6-202ENST00000377612 TEX261Q6UWH6 196 aa11.38□□□□□ -0.59
COMMD6-202ENST00000377612 CHCHD10Q8WYQ3 142 aaPredicted RBP11.38□□□□□ -0.59
COMMD6-202ENST00000377612 ISOC2Q96AB3 205 aa11.38□□□□□ -0.59
COMMD6-202ENST00000377612 TMEM191AQ9H0A3 160 aa11.38□□□□□ -0.59
COMMD6-202ENST00000377612 SMKR1H3BMG3 65 aa11.37□□□□□ -0.59
COMMD6-202ENST00000377612 H7C423 109 aa11.37□□□□□ -0.59
COMMD6-202ENST00000377612 I3L3M4 83 aa11.37□□□□□ -0.59
COMMD6-202ENST00000377612 RAB4AP20338 218 aa11.37□□□□□ -0.59
COMMD6-202ENST00000377612 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
COMMD6-202ENST00000377612 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
COMMD6-202ENST00000377612 RPL23P62829 140 aaKnown RBP11.36□□□□□ -0.59
COMMD6-202ENST00000377612 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
COMMD6-202ENST00000377612 FOXI1Q12951 378 aa11.36□□□□□ -0.59
COMMD6-202ENST00000377612 NUP35Q8NFH5 326 aa11.36□□□□□ -0.59
COMMD6-202ENST00000377612 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
COMMD6-202ENST00000377612 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
COMMD6-202ENST00000377612 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
COMMD6-202ENST00000377612 PMCHP20382 165 aa11.35□□□□□ -0.59
COMMD6-202ENST00000377612 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
COMMD6-202ENST00000377612 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
COMMD6-202ENST00000377612 ZNF25P17030 456 aaPredicted RBP11.34□□□□□ -0.59
COMMD6-202ENST00000377612 NRACQ8N912 160 aa11.34□□□□□ -0.59
COMMD6-202ENST00000377612 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
COMMD6-202ENST00000377612 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
COMMD6-202ENST00000377612 TRBV27A0A0K0K1C4 114 aa11.33□□□□□ -0.6
COMMD6-202ENST00000377612 MRAP2Q96G30 205 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms