RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 OVOL2Q9BRP0 275 aa12.03□□□□□ -0.48
HLA-A-202ENST00000376806 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
HLA-A-202ENST00000376806 K7EQD1 137 aa12.02□□□□□ -0.48
HLA-A-202ENST00000376806 SIVA1O15304 175 aa12.02□□□□□ -0.49
HLA-A-202ENST00000376806 C12orf54Q6X4T0 127 aa12.02□□□□□ -0.49
HLA-A-202ENST00000376806 NOTCH3Q9UM47 2321 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 GAGE12BA1L429 117 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 GAGE7O76087 117 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 GAGE12FP0CL80 117 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 GAGE12GP0CL81 117 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 GAGE12IP0CL82 117 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 TMEM97Q5BJF2 176 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 BVES-AS1Q5T3Y7 98 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 PHLDA1Q8WV24 401 aaPredicted RBP12.01□□□□□ -0.49
HLA-A-202ENST00000376806 OPRPNQ99935 248 aaPredicted RBP12.01□□□□□ -0.49
HLA-A-202ENST00000376806 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
HLA-A-202ENST00000376806 IGLV4-3A0A075B6K6 122 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 TRBV10-1A0A0K0K1A3 114 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 C11orf86A6NJI1 115 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 WFDC9Q8NEX5 89 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 COTL1Q14019 142 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
HLA-A-202ENST00000376806 TRRAPQ9Y4A5 3859 aa11.99□□□□□ -0.49
HLA-A-202ENST00000376806 EMP1P54849 157 aa11.99□□□□□ -0.49
HLA-A-202ENST00000376806 ZNRF2Q8NHG8 242 aa11.99□□□□□ -0.49
HLA-A-202ENST00000376806 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
HLA-A-202ENST00000376806 WIPF1O43516 503 aa11.98□□□□□ -0.49
HLA-A-202ENST00000376806 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
HLA-A-202ENST00000376806 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
HLA-A-202ENST00000376806 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
HLA-A-202ENST00000376806 TRAV8-6A0A0B4J262 113 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 E9PLD3 99 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 CIDEAO60543 219 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 HSD52Q0P140 79 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 C3orf56Q8N813 242 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 OR11H2Q8NH07 326 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 ZMAT5Q9UDW3 170 aaKnown RBP11.97□□□□□ -0.49
HLA-A-202ENST00000376806 X6R8D5 127 aa11.97□□□□□ -0.49
HLA-A-202ENST00000376806 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
HLA-A-202ENST00000376806 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
HLA-A-202ENST00000376806 NPSP0C0P6 89 aa11.96□□□□□ -0.49
HLA-A-202ENST00000376806 SPANXA1Q9NS26 97 aa11.96□□□□□ -0.49
HLA-A-202ENST00000376806 HIGD1BQ9P298 99 aa11.96□□□□□ -0.49
HLA-A-202ENST00000376806 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 MAPKAPK5-AS1Q8N8E1 139 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 UBE2D4Q9Y2X8 147 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 UBE2D3P61077 147 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 UBE2D2P62837 147 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 CEMP1Q6PRD7 247 aaPredicted RBP11.95□□□□□ -0.5
HLA-A-202ENST00000376806 PRADC1Q9BSG0 188 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 VCX2Q9H322 139 aa11.95□□□□□ -0.5
HLA-A-202ENST00000376806 SMIM9A6NGZ8 99 aa11.94□□□□□ -0.5
HLA-A-202ENST00000376806 CRYBA4P53673 196 aa11.94□□□□□ -0.5
HLA-A-202ENST00000376806 APOC4P55056 127 aa11.94□□□□□ -0.5
HLA-A-202ENST00000376806 HERVK_113P61574 105 aa11.94□□□□□ -0.5
HLA-A-202ENST00000376806 AMELXQ99217 191 aa11.94□□□□□ -0.5
HLA-A-202ENST00000376806 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 GAGE1Q13065 139 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 GAGE4Q13068 117 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 GAGE5Q13069 117 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
HLA-A-202ENST00000376806 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
HLA-A-202ENST00000376806 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 TRBV6-4A0A1B0GX49 114 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
HLA-A-202ENST00000376806 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
HLA-A-202ENST00000376806 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 SEC11AP67812 179 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 FHL2Q14192 279 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 DEFB135Q30KP9 77 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 SHISA2Q6UWI4 295 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 Q6ZUT4 128 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 ORAOV1Q8WV07 137 aa11.91□□□□□ -0.5
HLA-A-202ENST00000376806 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
HLA-A-202ENST00000376806 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.5
HLA-A-202ENST00000376806 TIMM21Q9BVV7 248 aa11.9□□□□□ -0.5
HLA-A-202ENST00000376806 ANK2Q01484 3957 aa11.9□□□□□ -0.51
HLA-A-202ENST00000376806 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
HLA-A-202ENST00000376806 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
HLA-A-202ENST00000376806 ZNF22P17026 224 aaPredicted RBP11.89□□□□□ -0.51
HLA-A-202ENST00000376806 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
HLA-A-202ENST00000376806 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
HLA-A-202ENST00000376806 Q6ZVH6 145 aa11.89□□□□□ -0.51
HLA-A-202ENST00000376806 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
HLA-A-202ENST00000376806 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
HLA-A-202ENST00000376806 TAX1BP3O14907 124 aa11.88□□□□□ -0.51
HLA-A-202ENST00000376806 SBSPONQ8IVN8 264 aa11.88□□□□□ -0.51
HLA-A-202ENST00000376806 PKD1L1Q8TDX9 2849 aa11.88□□□□□ -0.51
HLA-A-202ENST00000376806 TMEM223A0PJW6 202 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms