RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
TNFRSF1B-201ENST00000376259 Q9UF83 564 aa10.7□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TRAV8-4A0A0B4J246 113 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 COX8CQ7Z4L0 72 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CRIP2P52943 208 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ZFAND6Q6FIF0 208 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ZFHX3Q15911 3703 aa10.69□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TRAV26-1A0A087WT03 109 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ZNF415Q09FC8 603 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 LINC01356Q8N9X3 169 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 PSMG3-AS1Q96PY0 264 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 RHODO00212 210 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 M0QY20 66 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CRYGDP07320 174 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TEN1Q86WV5 123 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CELSR2Q9HCU4 2923 aa10.68□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TSHBP01222 138 aa10.67□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CFAP46Q8IYW2 2715 aa10.67□□□□□ -0.7
TNFRSF1B-201ENST00000376259 POLR2KP53803 58 aaKnown RBP10.67□□□□□ -0.7
TNFRSF1B-201ENST00000376259 A0A096LPF7 62 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 Q6ZUT4 128 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TEX49A0A1B0GTD5 131 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE7O76087 117 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 FLNAP21333 2647 aaKnown RBP10.66□□□□□ -0.7
TNFRSF1B-201ENST00000376259 IGLV4-69A0A075B6H9 119 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 DEFB130BP0DP73 79 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 DEFB130AP0DP74 79 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 Q9H8V8 135 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 PEMTQ9UBM1 199 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 NFE4Q86UQ8 179 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 IGHV4-4A0A075B6R2 117 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 IGIPA6NJ69 53 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 PFN2P35080 140 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
TNFRSF1B-201ENST00000376259 LEPROTO15243 131 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TRGV4A0A0C4DH28 118 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 B5MCH6 92 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 NDUFA7O95182 113 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 LINC00158P58513 81 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TRBV7-9A0A0J9YWB2 115 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
TNFRSF1B-201ENST00000376259 KLLNB2CW77 178 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 XGP55808 180 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 HECTD1Q9ULT8 2610 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 PRSS47A8MTI9 375 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 K7EQG2 157 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CFAP126Q5VTH2 177 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 Q96MF0 132 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CDKN2A-AS1Q9UH64 79 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 SOCS3O14543 225 aa10.63□□□□□ -0.71
TNFRSF1B-201ENST00000376259 INSP01308 110 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 GAGE6Q13070 117 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 LINC01620Q4KN68 170 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 NOP10Q9NPE3 64 aaKnown RBP10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 SS18L2Q9UHA2 77 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 VPREB3Q9UKI3 123 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 H3BMM0 161 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 H3BUA1 57 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 HTN3P15516 51 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 RHOHQ15669 191 aa10.62□□□□□ -0.71
TNFRSF1B-201ENST00000376259 C15orf53Q8NAA6 179 aa10.61□□□□□ -0.71
TNFRSF1B-201ENST00000376259 LINC01619G3V211 115 aa10.61□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
TNFRSF1B-201ENST00000376259 HIST2H2BCQ6DN03 193 aa10.61□□□□□ -0.71
TNFRSF1B-201ENST00000376259 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
TNFRSF1B-201ENST00000376259 DNAL4O96015 105 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 RNF183Q96D59 192 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 FBN2P35556 2912 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 NF1P21359 2839 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 IGHV3-33P01772 117 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
TNFRSF1B-201ENST00000376259 K7EMT4 169 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 PSMB8P28062 276 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 SMCPP49901 116 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 ITPR3Q14573 2671 aa10.59□□□□□ -0.71
TNFRSF1B-201ENST00000376259 CRYBA4P53673 196 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms