RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.77
SDHB-201ENST00000375499 KRTAP26-1Q6PEX3 210 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 PRR34Q9NV39 138 aa10.21□□□□□ -0.77
SDHB-201ENST00000375499 IGLV4-60A0A075B6I1 120 aa10.2□□□□□ -0.78
SDHB-201ENST00000375499 TEX261Q6UWH6 196 aa10.2□□□□□ -0.78
SDHB-201ENST00000375499 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
SDHB-201ENST00000375499 TMEM243Q9BU79 118 aa10.2□□□□□ -0.78
SDHB-201ENST00000375499 HIGD1CA8MV81 97 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 J3QL48 77 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 HLA-DQA1P01909 254 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 PKIAP61925 76 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 OSTCQ9NRP0 149 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 V9GYV3 84 aa10.19□□□□□ -0.78
SDHB-201ENST00000375499 RPL23P62829 140 aaKnown RBP10.18□□□□□ -0.78
SDHB-201ENST00000375499 Q6ZSA8 131 aa10.18□□□□□ -0.78
SDHB-201ENST00000375499 COTL1Q14019 142 aa10.17□□□□□ -0.78
SDHB-201ENST00000375499 MIAQ16674 131 aa10.17□□□□□ -0.78
SDHB-201ENST00000375499 RNF185Q96GF1 192 aa10.17□□□□□ -0.78
SDHB-201ENST00000375499 IGLV10-54A0A075B6I4 117 aa10.16□□□□□ -0.78
SDHB-201ENST00000375499 USP17L23D6RBM5 183 aa10.16□□□□□ -0.78
SDHB-201ENST00000375499 AMTP48728 403 aa10.16□□□□□ -0.78
SDHB-201ENST00000375499 REG3AQ06141 175 aa10.16□□□□□ -0.78
SDHB-201ENST00000375499 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 A0A1B0GUV1 79 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 TMEM241Q24JQ0 296 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 UBR4Q5T4S7 5183 aa10.15□□□□□ -0.78
SDHB-201ENST00000375499 MYCBP2O75592 4640 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 PRSS1P07477 247 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 RPS10P46783 165 aaKnown RBP10.14□□□□□ -0.79
SDHB-201ENST00000375499 ADIRFQ15847 76 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 AMN1Q8IY45 258 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
SDHB-201ENST00000375499 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
SDHB-201ENST00000375499 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
SDHB-201ENST00000375499 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
SDHB-201ENST00000375499 FAM74A3Q4VXF1 159 aa10.13□□□□□ -0.79
SDHB-201ENST00000375499 NAT8Q9UHE5 227 aa10.13□□□□□ -0.79
SDHB-201ENST00000375499 UBE2L6O14933 153 aa10.12□□□□□ -0.79
SDHB-201ENST00000375499 RAB4AP20338 218 aa10.12□□□□□ -0.79
SDHB-201ENST00000375499 BORCS7Q96B45 105 aa10.12□□□□□ -0.79
SDHB-201ENST00000375499 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
SDHB-201ENST00000375499 KRTAP29-1A8MX34 341 aaPredicted RBP10.11□□□□□ -0.79
SDHB-201ENST00000375499 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
SDHB-201ENST00000375499 NCR2O95944 276 aa10.11□□□□□ -0.79
SDHB-201ENST00000375499 PEA15Q15121 130 aa10.11□□□□□ -0.79
SDHB-201ENST00000375499 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
SDHB-201ENST00000375499 TSHBP01222 138 aa10.1□□□□□ -0.79
SDHB-201ENST00000375499 APCSP02743 223 aa10.1□□□□□ -0.79
SDHB-201ENST00000375499 C14orf177Q52M58 125 aa10.1□□□□□ -0.79
SDHB-201ENST00000375499 TMEM242Q9NWH2 141 aa10.1□□□□□ -0.79
SDHB-201ENST00000375499 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
SDHB-201ENST00000375499 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 IGKV3OR2-268A0A0C4DH90 116 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 I3L3M4 83 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
SDHB-201ENST00000375499 FGF6P10767 208 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 ESDP10768 282 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
SDHB-201ENST00000375499 RIGQ13278 110 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 MRAP2Q96G30 205 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 SMDT1Q9H4I9 107 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 ST20Q9HBF5 79 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 NAT8BQ9UHF3 227 aa10.08□□□□□ -0.8
SDHB-201ENST00000375499 PMCHP20382 165 aa10.07□□□□□ -0.8
SDHB-201ENST00000375499 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
SDHB-201ENST00000375499 NRACQ8N912 160 aa10.07□□□□□ -0.8
SDHB-201ENST00000375499 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
SDHB-201ENST00000375499 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
SDHB-201ENST00000375499 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 SLPIP03973 132 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 C15orf56Q8N910 161 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 CHAC1Q9BUX1 264 aa10.05□□□□□ -0.8
SDHB-201ENST00000375499 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 H7C423 109 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 PANO1I0J062 215 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 CAMPP49913 170 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 MRPL54Q6P161 138 aaKnown RBP10.04□□□□□ -0.8
SDHB-201ENST00000375499 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
SDHB-201ENST00000375499 A0A1B0GXF2 115 aa10.03□□□□□ -0.8
SDHB-201ENST00000375499 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
SDHB-201ENST00000375499 CHCHD10Q8WYQ3 142 aaPredicted RBP10.03□□□□□ -0.8
SDHB-201ENST00000375499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.03□□□□□ -0.8
SDHB-201ENST00000375499 PKHD1L1Q86WI1 4243 aa10.02□□□□□ -0.81
SDHB-201ENST00000375499 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
SDHB-201ENST00000375499 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
SDHB-201ENST00000375499 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
SDHB-201ENST00000375499 C7orf77A4D0Y5 90 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms