RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 KIR2DL5BQ8NHK3 375 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 PAPPA-AS1Q5QFB9 102 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 PCP2Q8IVA1 136 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 X6R8D5 127 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 IGLV4-3A0A075B6K6 122 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 SMIM9A6NGZ8 99 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 Q6ZTI0 123 aa8.95□□□□□ -0.98
PRPF4-202ENST00000374199 C11orf86A6NJI1 115 aa8.94□□□□□ -0.98
PRPF4-202ENST00000374199 RBX1P62877 108 aa8.94□□□□□ -0.98
PRPF4-202ENST00000374199 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
PRPF4-202ENST00000374199 C12orf54Q6X4T0 127 aa8.94□□□□□ -0.98
PRPF4-202ENST00000374199 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
PRPF4-202ENST00000374199 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
PRPF4-202ENST00000374199 UBE2D3P61077 147 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 UBE2D2P62837 147 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 ZNF479Q96JC4 524 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 GTSF1LQ9H1H1 148 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 UBE2V1Q13404 147 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 ZNRF2Q8NHG8 242 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
PRPF4-202ENST00000374199 COX11Q9Y6N1 276 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 TRBV6-4A0A1B0GX49 114 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 K7EQD1 137 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 HTN1P15515 57 aa8.93□□□□□ -0.98
PRPF4-202ENST00000374199 TNFRSF18Q9Y5U5 241 aa8.92□□□□□ -0.98
PRPF4-202ENST00000374199 TRBV7-3A0A075B6L6 115 aa8.92□□□□□ -0.98
PRPF4-202ENST00000374199 GTSCR1Q86UQ5 136 aa8.92□□□□□ -0.98
PRPF4-202ENST00000374199 IGHV3-73A0A0B4J1V6 119 aa8.92□□□□□ -0.98
PRPF4-202ENST00000374199 OR4C5Q8NGB2 326 aa8.92□□□□□ -0.98
PRPF4-202ENST00000374199 C2CD3Q4AC94 2353 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 HSD52Q0P140 79 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
PRPF4-202ENST00000374199 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
PRPF4-202ENST00000374199 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 A8MZ25 164 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 RPL35AP18077 110 aaKnown RBP8.91□□□□□ -0.98
PRPF4-202ENST00000374199 VAMP3Q15836 100 aa8.91□□□□□ -0.98
PRPF4-202ENST00000374199 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 NOP10Q9NPE3 64 aaKnown RBP8.9□□□□□ -0.98
PRPF4-202ENST00000374199 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 SEC11AP67812 179 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 EGFEM1PQ0D2K5 195 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 FHL2Q14192 279 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 TAL2Q16559 108 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
PRPF4-202ENST00000374199 RRN3P1Q2M238 152 aa8.9□□□□□ -0.99
PRPF4-202ENST00000374199 TMEM97Q5BJF2 176 aa8.89□□□□□ -0.99
PRPF4-202ENST00000374199 NTM-AS1Q6ZSK4 140 aa8.89□□□□□ -0.99
PRPF4-202ENST00000374199 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
PRPF4-202ENST00000374199 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
PRPF4-202ENST00000374199 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
PRPF4-202ENST00000374199 OR5A1Q8NGJ0 315 aa8.88□□□□□ -0.99
PRPF4-202ENST00000374199 TEP1Q99973 2627 aaKnown RBP8.88□□□□□ -0.99
PRPF4-202ENST00000374199 H7C423 109 aa8.88□□□□□ -0.99
PRPF4-202ENST00000374199 NMUP48645 174 aa8.88□□□□□ -0.99
PRPF4-202ENST00000374199 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
PRPF4-202ENST00000374199 MYMXA0A1B0GTQ4 84 aa8.87□□□□□ -0.99
PRPF4-202ENST00000374199 ZNF22P17026 224 aaPredicted RBP8.87□□□□□ -0.99
PRPF4-202ENST00000374199 OPRPNQ99935 248 aaPredicted RBP8.87□□□□□ -0.99
PRPF4-202ENST00000374199 IGHV3OR16-12A0A075B7B8 117 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 TINCRA0A1B0GVN0 87 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 TTTY13Q9BZ97 58 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 LYRM9A8MSI8 78 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 K7EP13 123 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 COTL1Q14019 142 aa8.86□□□□□ -0.99
PRPF4-202ENST00000374199 WNK1Q9H4A3 2382 aa8.85□□□□□ -0.99
PRPF4-202ENST00000374199 UBE2D1P51668 147 aa8.85□□□□□ -0.99
PRPF4-202ENST00000374199 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
PRPF4-202ENST00000374199 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
PRPF4-202ENST00000374199 PHLDA1Q8WV24 401 aaPredicted RBP8.85□□□□□ -0.99
PRPF4-202ENST00000374199 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
PRPF4-202ENST00000374199 Q8NAQ8 132 aa8.85□□□□□ -0.99
PRPF4-202ENST00000374199 APOC4P55056 127 aa8.84□□□□□ -0.99
PRPF4-202ENST00000374199 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
PRPF4-202ENST00000374199 TIRAPP58753 221 aa8.84□□□□□ -0.99
PRPF4-202ENST00000374199 LEPROTO15243 131 aa8.84□□□□□ -0.99
PRPF4-202ENST00000374199 OR11H2Q8NH07 326 aa8.84□□□□□ -0.99
PRPF4-202ENST00000374199 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
PRPF4-202ENST00000374199 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 VCX2Q9H322 139 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 GAGE12BA1L429 117 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 GAGE7O76087 117 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 GAGE12FP0CL80 117 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 GAGE12GP0CL81 117 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 GAGE12IP0CL82 117 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 CEND1Q8N111 149 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 RNF183Q96D59 192 aa8.83□□□□□ -1
PRPF4-202ENST00000374199 H3BRM9 83 aa8.82□□□□□ -1
PRPF4-202ENST00000374199 Q6ZUT4 128 aa8.82□□□□□ -1
PRPF4-202ENST00000374199 DEFB104AQ8WTQ1 72 aa8.82□□□□□ -1
PRPF4-202ENST00000374199 CYSRT1A8MQ03 144 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms