RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 LINC01548A6NM66 108 aa10.71□□□□□ -0.69
LMX1B-202ENST00000373474 CHD3Q12873 2000 aaKnown RBP10.71□□□□□ -0.7
LMX1B-202ENST00000373474 CRIP1P50238 77 aa10.71□□□□□ -0.7
LMX1B-202ENST00000373474 Q6Q795 121 aa10.71□□□□□ -0.7
LMX1B-202ENST00000373474 MAP6D1Q9H9H5 199 aa10.71□□□□□ -0.7
LMX1B-202ENST00000373474 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
LMX1B-202ENST00000373474 CCDC179H3BU77 68 aa10.7□□□□□ -0.7
LMX1B-202ENST00000373474 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
LMX1B-202ENST00000373474 LMO4P61968 165 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 TMEM223A0PJW6 202 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
LMX1B-202ENST00000373474 TRIAP1O43715 76 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 IGF1P05019 195 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
LMX1B-202ENST00000373474 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
LMX1B-202ENST00000373474 RNF185Q96GF1 192 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 PKDREJQ9NTG1 2253 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 GTF3C1Q12789 2109 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 H7C423 109 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 AKAP6Q13023 2319 aa10.68□□□□□ -0.7
LMX1B-202ENST00000373474 DOCK10Q96BY6 2186 aa10.67□□□□□ -0.7
LMX1B-202ENST00000373474 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
LMX1B-202ENST00000373474 EBI3Q14213 229 aa10.67□□□□□ -0.7
LMX1B-202ENST00000373474 MALRD1Q5VYJ5 2156 aa10.67□□□□□ -0.7
LMX1B-202ENST00000373474 TP73-AS1Q9UF72 201 aa10.67□□□□□ -0.7
LMX1B-202ENST00000373474 IBA57-AS1B1ANH7 110 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 M0QXV9 152 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 LINC00308Q8TCZ7 52 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 SERP1Q9Y6X1 66 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
LMX1B-202ENST00000373474 FAM222AQ5U5X8 452 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 ZFAND2AQ8N6M9 145 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 USF3Q68DE3 2245 aa10.66□□□□□ -0.7
LMX1B-202ENST00000373474 SMIM9A6NGZ8 99 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 SCXQ7RTU7 201 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 MED13Q9UHV7 2174 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 NACAE9PAV3 2078 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 CFAP126Q5VTH2 177 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 POLEQ07864 2286 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 ARHGAP21Q5T5U3 1957 aa10.65□□□□□ -0.7
LMX1B-202ENST00000373474 ESM1Q9NQ30 184 aa10.65□□□□□ -0.71
LMX1B-202ENST00000373474 LINC00694P0DN24 101 aa10.64□□□□□ -0.71
LMX1B-202ENST00000373474 KIR2DL5BQ8NHK3 375 aa10.64□□□□□ -0.71
LMX1B-202ENST00000373474 SNURFQ9Y675 71 aa10.64□□□□□ -0.71
LMX1B-202ENST00000373474 EP300Q09472 2414 aaPredicted RBP10.64□□□□□ -0.71
LMX1B-202ENST00000373474 Q6JHZ5 121 aa10.64□□□□□ -0.71
LMX1B-202ENST00000373474 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
LMX1B-202ENST00000373474 NCOR1O75376 2440 aa10.64□□□□□ -0.71
LMX1B-202ENST00000373474 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 K7EQG2 157 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 KLK12Q9UKR0 248 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 NCOA6Q14686 2063 aaPredicted RBP10.63□□□□□ -0.71
LMX1B-202ENST00000373474 PRO0255Q9UI72 69 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 ROS1P08922 2347 aa10.63□□□□□ -0.71
LMX1B-202ENST00000373474 CNOT1A5YKK6 2376 aaKnown RBP10.62□□□□□ -0.71
LMX1B-202ENST00000373474 LINC00467Q9BRT7 94 aa10.62□□□□□ -0.71
LMX1B-202ENST00000373474 PCDH15Q96QU1 1955 aa10.62□□□□□ -0.71
LMX1B-202ENST00000373474 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
LMX1B-202ENST00000373474 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
LMX1B-202ENST00000373474 XGP55808 180 aa10.62□□□□□ -0.71
LMX1B-202ENST00000373474 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
LMX1B-202ENST00000373474 PCNX3Q9H6A9 2034 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 LST1O00453 97 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 Q6YL49 198 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 SLPIP03973 132 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 WFDC10BQ8IUB3 73 aa10.61□□□□□ -0.71
LMX1B-202ENST00000373474 C10orf142B7Z368 130 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 C11orf71Q6IPW1 123 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 HRCT1Q6UXD1 115 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 Q8N9L7 120 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 ATG2AQ2TAZ0 1938 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 ABCA1O95477 2261 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 M0QY20 66 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
LMX1B-202ENST00000373474 CCKP06307 115 aa10.59□□□□□ -0.71
LMX1B-202ENST00000373474 Q6ZTI0 123 aa10.59□□□□□ -0.71
LMX1B-202ENST00000373474 DEFB4AO15263 64 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 MIFP14174 115 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 CEP192Q8TEP8 1941 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 PRORYQ9H606 182 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 PMAIP1Q13794 54 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 Q8N6K4 173 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 NRACQ8N912 160 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 INSL3P51460 131 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 COL6A6A6NMZ7 2263 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 TRAV7A0A075B6U4 112 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 RETNQ9HD89 108 aa10.58□□□□□ -0.72
LMX1B-202ENST00000373474 CADP27708 2225 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 ACACAQ13085 2346 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 LINC00526Q96FQ7 95 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 GPR179Q6PRD1 2367 aa10.57□□□□□ -0.72
LMX1B-202ENST00000373474 REG3AQ06141 175 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms