RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 SRSF9Q13242 221 aaKnown RBP eCLIP3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 Q6ZSN1 163 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 KIR2DL5AQ8N109 375 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A087WX48 190 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 LINC00315P59091 139 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 SHISA2Q6UWI4 295 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 PCP2Q8IVA1 136 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 CITED1Q99966 193 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
PCDH11X-204ENST00000373088 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 F8VRH5 84 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 K7EQD1 137 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 NXPH4O95158 308 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 POLR2KP53803 58 aaKnown RBP3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 GAGE6Q13070 117 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 ODF1Q14990 250 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 PMVKQ15126 192 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 MPV17L2Q567V2 206 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 FAM222AQ5U5X8 452 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 NEXN-AS1Q8NBZ9 246 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 TOMM6Q96B49 74 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 TRBV7-3A0A075B6L6 115 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 IGHV4-30-4P0DP06 118 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 PLNP26678 52 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 Q1RN00 199 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 LINC00469Q8N7U9 141 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 SLC25A29Q8N8R3 303 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 C11orf72Q8NBR9 251 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 BAALCQ8WXS3 180 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 RAB37Q96AX2 223 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 SNHG12Q9BXW3 62 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 IGLV2-18A0A075B6J9 118 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 RS1O15537 224 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 GYPEP15421 78 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 RNASE8Q8TDE3 154 aaKnown RBP3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 HIST1H4GQ99525 98 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 C2orf88Q9BSF0 95 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 CHAC1Q9BUX1 264 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 CBY1Q9Y3M2 126 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 TRAV4A0A0B4J268 109 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 PAX4O43316 350 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 RHOHQ15669 191 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 COL5A1-AS1Q5SY13 56 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 HHLA3Q9XRX5 114 aa3.29□□□□□ -1.88
PCDH11X-204ENST00000373088 TRBV27A0A0K0K1C4 114 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 ZNF815PA8K554 130 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 K7EMI3 77 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 PRSS2P07478 247 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 TMEM141Q96I45 108 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 C19orf73Q9NVV2 129 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 A0A0U1RRA0 63 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 TSHBP01222 138 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 COX8AP10176 69 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 POM121L12Q8N7R1 296 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 RETNQ9HD89 108 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 TOMM7Q9P0U1 55 aa3.28□□□□□ -1.88
PCDH11X-204ENST00000373088 TRBV25-1A0A075B6N4 114 aa3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 IGHV4-28A0A0C4DH34 117 aa3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 LINC01549A6NIU2 74 aa3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 TMEM243Q9BU79 118 aa3.28□□□□□ -1.89
PCDH11X-204ENST00000373088 TRBV6-5A0A0K0K1A5 114 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 C11orf86A6NJI1 115 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 CLPSL2Q6UWE3 100 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 DNAJC30Q96LL9 226 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 CST9LQ9H4G1 147 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 TENM1Q9UKZ4 2725 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 A8MTW9 85 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 SPART-AS1P0CW21 52 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 SMAGPQ0VAQ4 97 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 DAZ2Q13117 558 aaKnown RBP3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 NAA38Q9BRA0 125 aaKnown RBP3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 IGKV2D-26A0A0A0MRZ7 120 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 G3V4G9 280 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 FGF6P10767 208 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 Q6ZVH6 145 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 ATP6V0E2Q8NHE4 81 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 CLUHP3Q96NS8 147 aa3.27□□□□□ -1.89
PCDH11X-204ENST00000373088 SNCGO76070 127 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 RPL24P83731 157 aaKnown RBP3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 Q6ZUT4 128 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 PRIMA1Q86XR5 153 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 ZNF625Q96I27 306 aaPredicted RBP3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 TIMM17AQ99595 171 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 TRBV10-1A0A0K0K1A3 114 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 PRSS47A8MTI9 375 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 ATP5G1P05496 136 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 SPINK8P0C7L1 97 aa3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 DAZ4Q86SG3 579 aaKnown RBP3.26□□□□□ -1.89
PCDH11X-204ENST00000373088 DAZ3Q9NR90 486 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms