RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 TTC28Q96AY4 2481 aa17.41■□□□□ 0.38
CCND3-202ENST00000372988 K7EQG2 157 aa17.41■□□□□ 0.38
CCND3-202ENST00000372988 PROK1P58294 105 aa17.41■□□□□ 0.38
CCND3-202ENST00000372988 SNRPD3P62318 126 aaKnown RBP17.41■□□□□ 0.38
CCND3-202ENST00000372988 CFAP161Q6P656 301 aa17.41■□□□□ 0.38
CCND3-202ENST00000372988 ACYP1P07311 99 aa17.4■□□□□ 0.38
CCND3-202ENST00000372988 IMUPQ9GZP8 106 aa17.4■□□□□ 0.38
CCND3-202ENST00000372988 H3BUX3 64 aa17.39■□□□□ 0.38
CCND3-202ENST00000372988 TMEM126AQ9H061 195 aa17.39■□□□□ 0.38
CCND3-202ENST00000372988 SPTBN1Q01082 2364 aaKnown RBP17.39■□□□□ 0.37
CCND3-202ENST00000372988 IGHV3-73A0A0B4J1V6 119 aa17.39■□□□□ 0.37
CCND3-202ENST00000372988 NDUFA1O15239 70 aa17.38■□□□□ 0.37
CCND3-202ENST00000372988 DAND5Q8N907 189 aa17.38■□□□□ 0.37
CCND3-202ENST00000372988 TNFRSF18Q9Y5U5 241 aa17.38■□□□□ 0.37
CCND3-202ENST00000372988 IGHV4-38-2P0DP08 117 aa17.36■□□□□ 0.37
CCND3-202ENST00000372988 RBMY1A1P0DJD3 496 aaKnown RBP17.35■□□□□ 0.37
CCND3-202ENST00000372988 RBMY1CP0DJD4 496 aa17.35■□□□□ 0.37
CCND3-202ENST00000372988 RBMY1FQ15415 496 aaKnown RBP17.35■□□□□ 0.37
CCND3-202ENST00000372988 Q9UF83 564 aa17.35■□□□□ 0.37
CCND3-202ENST00000372988 FAM236AA0A1B0GUQ0 79 aa17.35■□□□□ 0.37
CCND3-202ENST00000372988 FAM236BA0A1B0GV22 79 aa17.35■□□□□ 0.37
CCND3-202ENST00000372988 ABCA2Q9BZC7 2435 aa17.34■□□□□ 0.37
CCND3-202ENST00000372988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.34■□□□□ 0.37
CCND3-202ENST00000372988 IGLV5-45A0A087WSX0 123 aa17.34■□□□□ 0.37
CCND3-202ENST00000372988 IGKV2-29A2NJV5 120 aaPredicted RBP17.34■□□□□ 0.37
CCND3-202ENST00000372988 SMCR5Q8TEV8 140 aa17.34■□□□□ 0.37
CCND3-202ENST00000372988 COX7A2LO14548 114 aa17.33■□□□□ 0.37
CCND3-202ENST00000372988 LINC00308Q8TCZ7 52 aa17.33■□□□□ 0.37
CCND3-202ENST00000372988 DUX5Q96PT3 197 aa17.33■□□□□ 0.37
CCND3-202ENST00000372988 CDKN2A-AS1Q9UH64 79 aa17.33■□□□□ 0.37
CCND3-202ENST00000372988 RIF1Q5UIP0 2472 aaKnown RBP17.33■□□□□ 0.37
CCND3-202ENST00000372988 TIRAPP58753 221 aa17.33■□□□□ 0.36
CCND3-202ENST00000372988 LINC00467Q9BRT7 94 aa17.33■□□□□ 0.36
CCND3-202ENST00000372988 Q6ZSN1 163 aa17.32■□□□□ 0.36
CCND3-202ENST00000372988 C3orf56Q8N813 242 aa17.32■□□□□ 0.36
CCND3-202ENST00000372988 PTPRQQ9UMZ3 2332 aa17.31■□□□□ 0.36
CCND3-202ENST00000372988 SDIM1Q6ZPB5 146 aa17.31■□□□□ 0.36
CCND3-202ENST00000372988 PSMB8P28062 276 aa17.3■□□□□ 0.36
CCND3-202ENST00000372988 CIRBPQ14011 172 aaKnown RBP17.3■□□□□ 0.36
CCND3-202ENST00000372988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.3■□□□□ 0.36
CCND3-202ENST00000372988 PTPRZ1P23471 2315 aaPredicted RBP17.3■□□□□ 0.36
CCND3-202ENST00000372988 ZFHX2Q9C0A1 2572 aaPredicted RBP17.3■□□□□ 0.36
CCND3-202ENST00000372988 LY6DQ14210 128 aa17.3■□□□□ 0.36
CCND3-202ENST00000372988 LINC00643Q86TS7 51 aa17.3■□□□□ 0.36
CCND3-202ENST00000372988 CELSR1Q9NYQ6 3014 aa17.29■□□□□ 0.36
CCND3-202ENST00000372988 BEAN1Q3B7T3 259 aa17.29■□□□□ 0.36
CCND3-202ENST00000372988 KNCNA6PVL3 124 aa17.28■□□□□ 0.36
CCND3-202ENST00000372988 TMEM95Q3KNT9 176 aa17.28■□□□□ 0.36
CCND3-202ENST00000372988 SPTA1P02549 2419 aa17.27■□□□□ 0.36
CCND3-202ENST00000372988 IGLV5-39A0A0G2JS06 123 aa17.27■□□□□ 0.36
CCND3-202ENST00000372988 KLRB1Q12918 225 aa17.27■□□□□ 0.36
CCND3-202ENST00000372988 DOPEY2Q9Y3R5 2298 aa17.27■□□□□ 0.36
CCND3-202ENST00000372988 COL6A6A6NMZ7 2263 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 COX6A2Q02221 97 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 PIK3CD-AS1Q5SR53 167 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 SOSTDC1Q6X4U4 206 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 Q8N2B8 174 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 C3orf22Q8N5N4 141 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 Q9H8V8 135 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 VPREB3Q9UKI3 123 aa17.26■□□□□ 0.35
CCND3-202ENST00000372988 IGHV4-61A0A0C4DH41 118 aa17.25■□□□□ 0.35
CCND3-202ENST00000372988 TRACP01848 142 aa17.25■□□□□ 0.35
CCND3-202ENST00000372988 HTN1P15515 57 aa17.25■□□□□ 0.35
CCND3-202ENST00000372988 DAZ2Q13117 558 aaKnown RBP17.25■□□□□ 0.35
CCND3-202ENST00000372988 DAZ4Q86SG3 579 aaKnown RBP17.25■□□□□ 0.35
CCND3-202ENST00000372988 DAZ3Q9NR90 486 aaKnown RBP17.25■□□□□ 0.35
CCND3-202ENST00000372988 C22orf24Q9Y442 160 aa17.25■□□□□ 0.35
CCND3-202ENST00000372988 PRORYQ9H606 182 aa17.24■□□□□ 0.35
CCND3-202ENST00000372988 NACAE9PAV3 2078 aa17.24■□□□□ 0.35
CCND3-202ENST00000372988 NBASA2RRP1 2371 aa17.23■□□□□ 0.35
CCND3-202ENST00000372988 IGHV3-38A0A0C4DH36 116 aa17.23■□□□□ 0.35
CCND3-202ENST00000372988 C10orf99Q6UWK7 81 aa17.23■□□□□ 0.35
CCND3-202ENST00000372988 DNAJC30Q96LL9 226 aa17.23■□□□□ 0.35
CCND3-202ENST00000372988 CEP295Q9C0D2 2601 aa17.22■□□□□ 0.35
CCND3-202ENST00000372988 PRM2P04554 102 aa17.22■□□□□ 0.35
CCND3-202ENST00000372988 PEMTQ9UBM1 199 aa17.22■□□□□ 0.35
CCND3-202ENST00000372988 SPTAN1Q13813 2472 aaKnown RBP17.22■□□□□ 0.35
CCND3-202ENST00000372988 IGHV3OR16-12A0A075B7B8 117 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 COPS9Q8WXC6 57 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 VPS13CQ709C8 3753 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 ATP5G1P05496 136 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 BAALC-AS2P0C853 105 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 SYNJ2BPP57105 145 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 C5orf38Q86SI9 138 aa17.21■□□□□ 0.35
CCND3-202ENST00000372988 UQCRQO14949 82 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 NDUFA7O95182 113 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 IGHV3-53P01767 116 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 CXCL5P42830 114 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 C9orf153Q5TBE3 101 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 A8MTW9 85 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 ZNF625Q96I27 306 aaPredicted RBP17.2■□□□□ 0.34
CCND3-202ENST00000372988 PPDPFQ9H3Y8 114 aa17.2■□□□□ 0.34
CCND3-202ENST00000372988 HERVK_113P63121 156 aa17.19■□□□□ 0.34
CCND3-202ENST00000372988 LINC00242Q5T6M2 205 aa17.19■□□□□ 0.34
CCND3-202ENST00000372988 FAM222AQ5U5X8 452 aa17.19■□□□□ 0.34
CCND3-202ENST00000372988 LINC00526Q96FQ7 95 aa17.19■□□□□ 0.34
CCND3-202ENST00000372988 A0A0U1RRA0 63 aa17.18■□□□□ 0.34
CCND3-202ENST00000372988 ZNF415Q09FC8 603 aa17.18■□□□□ 0.34
CCND3-202ENST00000372988 FAM19A3Q7Z5A8 133 aa17.18■□□□□ 0.34
CCND3-202ENST00000372988 TMEM89A2RUT3 159 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms