RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FAM231AP0DMU4 169 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 FAM231CP0DMU5 169 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 RHOHQ15669 191 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 NEXN-AS1Q8NBZ9 246 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 OVOL2Q9BRP0 275 aa9.31□□□□□ -0.92
LDB3-203ENST00000372056 IGIPA6NJ69 53 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 I3L3M4 83 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 MIFP14174 115 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 BAALCQ8WXS3 180 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 TRGV1A0A0A0MS02 117 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 PLNP26678 52 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 RPL39P62891 51 aaKnown RBP9.3□□□□□ -0.92
LDB3-203ENST00000372056 CST9LQ9H4G1 147 aa9.3□□□□□ -0.92
LDB3-203ENST00000372056 PLAC8L1A1L4L8 177 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 F8VRH5 84 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 G3V4G9 280 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 FGF6P10767 208 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 OCIAD2Q56VL3 154 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 RNF183Q96D59 192 aa9.29□□□□□ -0.92
LDB3-203ENST00000372056 Q6ZTI0 123 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 TMEM141Q96I45 108 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 TIMM17AQ99595 171 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 Q9UF83 564 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 TNFRSF18Q9Y5U5 241 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 TCTAP57738 103 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
LDB3-203ENST00000372056 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
LDB3-203ENST00000372056 PRSS29PA6NIE9 313 aa9.27□□□□□ -0.93
LDB3-203ENST00000372056 LYRM9A8MSI8 78 aa9.27□□□□□ -0.93
LDB3-203ENST00000372056 BOD1L2Q8IYS8 172 aa9.27□□□□□ -0.93
LDB3-203ENST00000372056 C20orf203Q8NBC4 194 aa9.27□□□□□ -0.93
LDB3-203ENST00000372056 NOP10Q9NPE3 64 aaKnown RBP9.27□□□□□ -0.93
LDB3-203ENST00000372056 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
LDB3-203ENST00000372056 SEC11AP67812 179 aa9.26□□□□□ -0.93
LDB3-203ENST00000372056 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
LDB3-203ENST00000372056 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
LDB3-203ENST00000372056 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
LDB3-203ENST00000372056 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 NMUP48645 174 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 OR11H2Q8NH07 326 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 ZNF479Q96JC4 524 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 RNF151Q2KHN1 245 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 PCP2Q8IVA1 136 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 X6R8D5 127 aa9.25□□□□□ -0.93
LDB3-203ENST00000372056 TRAV8-6A0A0B4J262 113 aa9.24□□□□□ -0.93
LDB3-203ENST00000372056 PMVKQ15126 192 aa9.24□□□□□ -0.93
LDB3-203ENST00000372056 DEFB135Q30KP9 77 aa9.24□□□□□ -0.93
LDB3-203ENST00000372056 STAB1Q9NY15 2570 aa9.24□□□□□ -0.93
LDB3-203ENST00000372056 TMEM97Q5BJF2 176 aa9.23□□□□□ -0.93
LDB3-203ENST00000372056 IGLV4-69A0A075B6H9 119 aa9.23□□□□□ -0.93
LDB3-203ENST00000372056 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
LDB3-203ENST00000372056 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
LDB3-203ENST00000372056 TRBV10-1A0A0K0K1A3 114 aa9.22□□□□□ -0.93
LDB3-203ENST00000372056 NBEAL2Q6ZNJ1 2754 aa9.22□□□□□ -0.93
LDB3-203ENST00000372056 GAGE12BA1L429 117 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 H3BRM9 83 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 K7EQD1 137 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 K7ERU9 68 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 SIVA1O15304 175 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 GAGE7O76087 117 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 GAGE12FP0CL80 117 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 GAGE12GP0CL81 117 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 GAGE12IP0CL82 117 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 SPART-AS1P0CW21 52 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.93
LDB3-203ENST00000372056 VPS25Q9BRG1 176 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 TRRAPQ9Y4A5 3859 aa9.21□□□□□ -0.93
LDB3-203ENST00000372056 TRBV7-3A0A075B6L6 115 aa9.21□□□□□ -0.94
LDB3-203ENST00000372056 SPATA25Q9BR10 227 aa9.21□□□□□ -0.94
LDB3-203ENST00000372056 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.94
LDB3-203ENST00000372056 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 C11orf86A6NJI1 115 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 PAPPA-AS1Q5QFB9 102 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
LDB3-203ENST00000372056 PHLDA1Q8WV24 401 aaPredicted RBP9.2□□□□□ -0.94
LDB3-203ENST00000372056 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
LDB3-203ENST00000372056 Q8NAQ8 132 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 TRBV6-4A0A1B0GX49 114 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 A6NDN8 102 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 EMP1P54849 157 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
LDB3-203ENST00000372056 HSD52Q0P140 79 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 GTF2H5Q6ZYL4 71 aa9.19□□□□□ -0.94
LDB3-203ENST00000372056 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
LDB3-203ENST00000372056 IGHV4-28A0A0C4DH34 117 aa9.18□□□□□ -0.94
LDB3-203ENST00000372056 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
LDB3-203ENST00000372056 E9PLD3 99 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 K7EP34 96 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 CRYBA4P53673 196 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms