RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LINC00315P59091 139 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 C18orf65Q6ZTR6 163 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
TSPAN1-201ENST00000372003 TRAV26-1A0A087WT03 109 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 A0A0J9YX75 114 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 DUSP14O95147 198 aaKnown RBP8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 TSHBP01222 138 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 RHOHQ15669 191 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 Q6ZQT7 251 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 TP53TG1Q9Y2A0 90 aa8.5□□□□□ -1.05
TSPAN1-201ENST00000372003 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 TRBV27A0A0K0K1C4 114 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 LGALS9O00182 355 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 LEPROTO15243 131 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 MT-ATP8P03928 68 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 ARL3P36405 182 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 XGP55808 180 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 RNF152Q8N8N0 203 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 KLHL30-AS1Q8NEE0 82 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
TSPAN1-201ENST00000372003 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 J3QQQ9 107 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 SCGB1C2P0DMR2 95 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 AMELXQ99217 191 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
TSPAN1-201ENST00000372003 IGHV3-49A0A0A0MS15 119 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 ADARB2-AS1A8MUL3 147 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 KLLNB2CW77 178 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 ZFAND6Q6FIF0 208 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 UBE2E2Q96LR5 201 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 DUX3Q96PT4 197 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 FHL3Q13643 280 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 DEFB136Q30KP8 78 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 Q6Q795 121 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 ANKRD29Q8N6D5 301 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 ODF3Q96PU9 254 aa8.47□□□□□ -1.05
TSPAN1-201ENST00000372003 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 GNRH2O43555 120 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 SLC25A20O43772 301 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 IGHV3-33P01772 117 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 SUMO4Q6EEV6 95 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 TMEM263Q8WUH6 116 aaKnown RBP8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 MDFICQ9P1T7 246 aa8.46□□□□□ -1.06
TSPAN1-201ENST00000372003 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
TSPAN1-201ENST00000372003 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
TSPAN1-201ENST00000372003 FAM159AQ6UWV7 190 aa8.45□□□□□ -1.06
TSPAN1-201ENST00000372003 C4orf3Q8WVX3 66 aa8.45□□□□□ -1.06
TSPAN1-201ENST00000372003 PTH2Q96A98 100 aa8.45□□□□□ -1.06
TSPAN1-201ENST00000372003 ID1P41134 155 aa8.44□□□□□ -1.06
TSPAN1-201ENST00000372003 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
TSPAN1-201ENST00000372003 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
TSPAN1-201ENST00000372003 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
TSPAN1-201ENST00000372003 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 A4D1N5 150 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 K7EMT4 169 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 CCL24O00175 119 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 TRBV12-3P01733 135 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 PF4P02776 101 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 MRPL23Q16540 153 aaKnown RBP8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 M0R2P5 195 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 RHODO00212 210 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 TRPT1Q86TN4 253 aaKnown RBP8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 RNF183Q96D59 192 aa8.43□□□□□ -1.06
TSPAN1-201ENST00000372003 GAGE5Q13069 117 aa8.42□□□□□ -1.06
TSPAN1-201ENST00000372003 GAGE6Q13070 117 aa8.42□□□□□ -1.06
TSPAN1-201ENST00000372003 EDA2RQ9HAV5 297 aa8.42□□□□□ -1.06
TSPAN1-201ENST00000372003 TRBV10-2A0A0K0K1G8 114 aa8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 C9JAW5 83 aa8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 SLURP1P55000 103 aa8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 RPL39P62891 51 aaKnown RBP8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
TSPAN1-201ENST00000372003 F5H697 171 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 M0QY20 66 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 SNCGO76070 127 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 GAGE2BQ13066 116 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 C20orf203Q8NBC4 194 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 DAZ1Q9NQZ3 744 aaKnown RBP8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 ZNF256Q9Y2P7 627 aaPredicted RBP8.4□□□□□ -1.06
TSPAN1-201ENST00000372003 H3BT86 120 aa8.4□□□□□ -1.07
TSPAN1-201ENST00000372003 SPRY2O43597 315 aa8.4□□□□□ -1.07
TSPAN1-201ENST00000372003 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms