RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 COTL1Q14019 142 aa11.09□□□□□ -0.63
LRRC42-202ENST00000371368 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
LRRC42-202ENST00000371368 FLG2Q5D862 2391 aaPredicted RBP11.08□□□□□ -0.64
LRRC42-202ENST00000371368 IGLV4-60A0A075B6I1 120 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 AMTP48728 403 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
LRRC42-202ENST00000371368 DMBT1Q9UGM3 2413 aaPredicted RBP11.07□□□□□ -0.64
LRRC42-202ENST00000371368 TRAV8-4A0A0B4J246 113 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 UBE2L6O14933 153 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 CEBPGP53567 150 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
LRRC42-202ENST00000371368 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 MYCBP2O75592 4640 aa11.07□□□□□ -0.64
LRRC42-202ENST00000371368 A8MWL6 223 aa11.06□□□□□ -0.64
LRRC42-202ENST00000371368 C9orf163Q8N9P6 203 aa11.06□□□□□ -0.64
LRRC42-202ENST00000371368 HERC1Q15751 4861 aa11.06□□□□□ -0.64
LRRC42-202ENST00000371368 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
LRRC42-202ENST00000371368 EIF5A2Q9GZV4 153 aaKnown RBP11.05□□□□□ -0.64
LRRC42-202ENST00000371368 CT83Q5H943 113 aa11.04□□□□□ -0.64
LRRC42-202ENST00000371368 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
LRRC42-202ENST00000371368 CLRN3Q8NCR9 226 aa11.04□□□□□ -0.64
LRRC42-202ENST00000371368 NDUFS6O75380 124 aaKnown RBP11.03□□□□□ -0.64
LRRC42-202ENST00000371368 SMIM7Q9BQ49 75 aa11.03□□□□□ -0.64
LRRC42-202ENST00000371368 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
LRRC42-202ENST00000371368 hDV102S1A0JD36 115 aa11.01□□□□□ -0.65
LRRC42-202ENST00000371368 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
LRRC42-202ENST00000371368 J3QL48 77 aa11.01□□□□□ -0.65
LRRC42-202ENST00000371368 NCR2O95944 276 aa11.01□□□□□ -0.65
LRRC42-202ENST00000371368 LINC01551Q86U37 167 aa11.01□□□□□ -0.65
LRRC42-202ENST00000371368 ZNF727A8MUV8 499 aa11□□□□□ -0.65
LRRC42-202ENST00000371368 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
LRRC42-202ENST00000371368 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
LRRC42-202ENST00000371368 SDIM1Q6ZPB5 146 aa11□□□□□ -0.65
LRRC42-202ENST00000371368 TSKUQ8WUA8 353 aa11□□□□□ -0.65
LRRC42-202ENST00000371368 BORCS7Q96B45 105 aa11□□□□□ -0.65
LRRC42-202ENST00000371368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
LRRC42-202ENST00000371368 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
LRRC42-202ENST00000371368 H7C423 109 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 APCSP02743 223 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 PMCHP20382 165 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 CNBPP62633 177 aaKnown RBP10.99□□□□□ -0.65
LRRC42-202ENST00000371368 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
LRRC42-202ENST00000371368 IGKV3OR2-268A0A0C4DH90 116 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 A0A1B0GVG6 124 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 GAGE12HA6NDE8 117 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
LRRC42-202ENST00000371368 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
LRRC42-202ENST00000371368 AP5S1Q9NUS5 200 aa10.98□□□□□ -0.65
LRRC42-202ENST00000371368 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
LRRC42-202ENST00000371368 FAM231BA6NCW3 169 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 PANO1I0J062 215 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 I3L3M4 83 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 SLPIP03973 132 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 FGF6P10767 208 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 TMEM191AQ9H0A3 160 aa10.97□□□□□ -0.65
LRRC42-202ENST00000371368 ST20Q9HBF5 79 aa10.96□□□□□ -0.65
LRRC42-202ENST00000371368 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
LRRC42-202ENST00000371368 RAB4AP20338 218 aa10.95□□□□□ -0.66
LRRC42-202ENST00000371368 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
LRRC42-202ENST00000371368 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
LRRC42-202ENST00000371368 V9GYV3 84 aa10.95□□□□□ -0.66
LRRC42-202ENST00000371368 IGHV3-64A0A075B6Q5 118 aa10.94□□□□□ -0.66
LRRC42-202ENST00000371368 TSHBP01222 138 aa10.94□□□□□ -0.66
LRRC42-202ENST00000371368 RPL37AP61513 92 aaKnown RBP10.94□□□□□ -0.66
LRRC42-202ENST00000371368 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
LRRC42-202ENST00000371368 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
LRRC42-202ENST00000371368 CHCHD10Q8WYQ3 142 aaPredicted RBP10.94□□□□□ -0.66
LRRC42-202ENST00000371368 ESDP10768 282 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 ZNF25P17030 456 aaPredicted RBP10.93□□□□□ -0.66
LRRC42-202ENST00000371368 POLR2KP53803 58 aaKnown RBP10.93□□□□□ -0.66
LRRC42-202ENST00000371368 FAM74A3Q4VXF1 159 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 ISOC2Q96AB3 205 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 BTF3L4Q96K17 158 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 TMEM242Q9NWH2 141 aa10.93□□□□□ -0.66
LRRC42-202ENST00000371368 RPS10P46783 165 aaKnown RBP10.92□□□□□ -0.66
LRRC42-202ENST00000371368 RIGQ13278 110 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
LRRC42-202ENST00000371368 AMN1Q8IY45 258 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 NUP35Q8NFH5 326 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 TMEM101Q96IK0 257 aa10.92□□□□□ -0.66
LRRC42-202ENST00000371368 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
LRRC42-202ENST00000371368 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
LRRC42-202ENST00000371368 C9JQL5 133 aa10.9□□□□□ -0.66
LRRC42-202ENST00000371368 HIGD2BQ4VC39 106 aa10.9□□□□□ -0.66
LRRC42-202ENST00000371368 SMKR1H3BMG3 65 aa10.89□□□□□ -0.67
LRRC42-202ENST00000371368 OXTP01178 125 aa10.89□□□□□ -0.67
LRRC42-202ENST00000371368 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
LRRC42-202ENST00000371368 FOXI1Q12951 378 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms