RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
SMARCA1-203ENST00000371123 A0A096LPF7 62 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 IGIPA6NJ69 53 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 LINC00311Q8N616 119 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 LITAFQ99732 161 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 RBAKDNA6NC62 111 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 HTN3P15516 51 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 TRAV21A0A0B4J279 112 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 A8MZ25 164 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 PDE6HQ13956 83 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 MUSTN1Q8IVN3 82 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
SMARCA1-203ENST00000371123 CD28P10747 220 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 KLRB1Q12918 225 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 DEFB131AP59861 70 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 TRAV8-3A0A0A6YYJ7 113 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
SMARCA1-203ENST00000371123 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 LINC00315P59091 139 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 TRAV8-4A0A0B4J246 113 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 RPL35AP18077 110 aaKnown RBP6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 APRG1Q8IVJ8 170 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 ESM1Q9NQ30 184 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 KIR2DL5BQ8NHK3 375 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
SMARCA1-203ENST00000371123 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 SMIM9A6NGZ8 99 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 PPP1R17O96001 155 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 IGHV4-59P01825 116 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 DEFB121Q5J5C9 76 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 BUB3O43684 328 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 SNRPD3P62318 126 aaKnown RBP6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 TMEM30BQ3MIR4 351 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 CLPSL2Q6UWE3 100 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 Q8N9W7 124 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 A0A0J9YXV3 536 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 PROK1P58294 105 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
SMARCA1-203ENST00000371123 NOTCH1P46531 2555 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 IGLV11-55A0A075B6I3 123 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 SLC50A1Q9BRV3 221 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 LY6LH3BQJ8 138 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 C19orf84I3L1E1 186 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 HERVK_113P63121 156 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 C8orf31Q8N9H6 132 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 A0A1W2PPR1 153 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 UBE2E1P51965 193 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 PIMREGQ9BSJ6 248 aa6.5□□□□□ -1.37
SMARCA1-203ENST00000371123 TRGV1A0A0A0MS02 117 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 HELZ2Q9BYK8 2649 aaKnown RBP6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 NDUFA7O95182 113 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 H3BMM0 161 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 ADORA2A-AS1P86434 159 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 IGFL2Q6UWQ7 119 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 EDA2RQ9HAV5 297 aa6.49□□□□□ -1.37
SMARCA1-203ENST00000371123 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 J3QQQ9 107 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 K7ENP7 123 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 CCDC140Q96MF4 163 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 TMEM126AQ9H061 195 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 MOB4Q9Y3A3 225 aa6.48□□□□□ -1.37
SMARCA1-203ENST00000371123 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 Q5XG85 94 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 IGFL3Q6UXB1 125 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 UNC79Q9P2D8 2635 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 PFN2P35080 140 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 C4orf26Q17RF5 130 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 NSUN5P1Q3KNT7 163 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 KAAG1Q9UBP8 84 aa6.47□□□□□ -1.37
SMARCA1-203ENST00000371123 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.37
SMARCA1-203ENST00000371123 RNASE3P12724 160 aaKnown RBP6.46□□□□□ -1.37
SMARCA1-203ENST00000371123 SLURP1P55000 103 aa6.46□□□□□ -1.38
SMARCA1-203ENST00000371123 C19orf54Q5BKX5 351 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms