RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SLC25A22Q9H936 323 aa2.72□□□□□ -1.97
MCF2-203ENST00000370576 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
MCF2-203ENST00000370576 ALMS1Q8TCU4 4167 aa2.71□□□□□ -1.97
MCF2-203ENST00000370576 NACAE9PAV3 2078 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 MT-ND6P03923 174 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 INAFM2P0DMQ5 153 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 SPANXDQ9BXN6 97 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 SND1-IT1Q9HBX3 110 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 PLCE1Q9P212 2302 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 ABCA4P78363 2273 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 K7EMI3 77 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 HLA-DRB4P13762 266 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 WFDC9Q8NEX5 89 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 PAM16Q9Y3D7 125 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 HLA-DRB4X5D2U9 266 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 MXRA5Q9NR99 2828 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 IGLV5-37A0A075B6J1 123 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 TRAV12-2A0A075B6T6 113 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 IGHV4OR15-8A0A075B7B6 117 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 A0A087WW49 117 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 TRAV40A0A0B4J280 105 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 IGHV3-16A0A0C4DH30 117 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 TRBV7-7A0A0K0K1E9 115 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 OR2T8A6NH00 312 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 COX7A2LO14548 114 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 IQCJQ1A5X6 159 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 C15orf32Q32M92 178 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 BPIFA4PQ86YQ2 179 aa2.71□□□□□ -1.98
MCF2-203ENST00000370576 DOPEY2Q9Y3R5 2298 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 COX7A1P24310 79 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 SPINK9Q5DT21 86 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 GTSCR1Q86UQ5 136 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 GNG13Q9P2W3 67 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 RABAC1Q9UI14 185 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 FLNCQ14315 2725 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 SPTA1P02549 2419 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 TRBV6-5A0A0K0K1A5 114 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 IGLC3P0DOY3 106 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 VPS13DQ5THJ4 4388 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.7□□□□□ -1.98
MCF2-203ENST00000370576 RTTNQ86VV8 2226 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 IGLV5-45A0A087WSX0 123 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 A0A087X002 238 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 H3BUX3 64 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 APOC3P02656 99 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 PYYP10082 97 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 DIRC1Q969H9 104 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 CHAC1Q9BUX1 264 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
MCF2-203ENST00000370576 NAV3Q8IVL0 2385 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 A0A1W2PS18 150 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 IBA57-AS1B1ANH7 110 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 COX7A2P2O60397 106 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 GIG44P09565 113 aaPredicted RBP2.69□□□□□ -1.98
MCF2-203ENST00000370576 EIF5A2Q9GZV4 153 aaKnown RBP2.69□□□□□ -1.98
MCF2-203ENST00000370576 RPP21Q9H633 154 aaKnown RBP2.69□□□□□ -1.98
MCF2-203ENST00000370576 HILPDAQ9Y5L2 63 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 FLNBO75369 2602 aaKnown RBP2.69□□□□□ -1.98
MCF2-203ENST00000370576 ABCA12Q86UK0 2595 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 A0A096LNJ9 63 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 G3V318 75 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 IGLV1-51P01701 117 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 IGHV3-7P01780 117 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 DEFA4P12838 97 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 BLCAPP62952 87 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 NDUFA11Q86Y39 141 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 C15orf56Q8N910 161 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 WFDC11Q8NEX6 87 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 TMEM243Q9BU79 118 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 CSMD1Q96PZ7 3565 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 IGHV3-72A0A0B4J1Y9 119 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 IGKV3D-20A0A0C4DH25 116 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 A0A0J9YX75 114 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 SLURP1P55000 103 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 AKR1C1Q04828 323 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 MUC21Q5SSG8 566 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 NRACQ8N912 160 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 OPRPNQ99935 248 aaPredicted RBP2.69□□□□□ -1.98
MCF2-203ENST00000370576 SMIM7Q9BQ49 75 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 KLK15Q9H2R5 256 aa2.69□□□□□ -1.98
MCF2-203ENST00000370576 C2orf70A6NJV1 201 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 H3BT86 120 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 PRR9Q5T870 116 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 CEMP1Q6PRD7 247 aaPredicted RBP2.68□□□□□ -1.98
MCF2-203ENST00000370576 Q6ZN92 141 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 DPH3P1Q9H4G8 78 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 SERP1Q9Y6X1 66 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 NAV2Q8IVL1 2488 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 TRBV27A0A0K0K1C4 114 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 UBE2L3P68036 154 aaKnown RBP2.68□□□□□ -1.98
MCF2-203ENST00000370576 LINC01554Q52M75 96 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 ZNF705AQ6ZN79 300 aaPredicted RBP2.68□□□□□ -1.98
MCF2-203ENST00000370576 OR4X2Q8NGF9 303 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
MCF2-203ENST00000370576 PKHD1P08F94 4074 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 TNCP24821 2201 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 ICE1Q9Y2F5 2266 aa2.68□□□□□ -1.98
MCF2-203ENST00000370576 ANKHD1Q8IWZ3 2542 aaKnown RBP2.68□□□□□ -1.98
MCF2-203ENST00000370576 DNAH2Q9P225 4427 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms