RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 MED14OSP0DP75 135 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 ZNF80P51504 273 aaPredicted RBP10.88□□□□□ -0.67
LMO4-201ENST00000370542 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 TEN1Q86WV5 123 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 NRACQ8N912 160 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 TOMM6Q96B49 74 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
LMO4-201ENST00000370542 UBE2D1P51668 147 aa10.87□□□□□ -0.67
LMO4-201ENST00000370542 APOC4P55056 127 aa10.87□□□□□ -0.67
LMO4-201ENST00000370542 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
LMO4-201ENST00000370542 HECTD4Q9Y4D8 3996 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 SPRY2O43597 315 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 UBE2D3P61077 147 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 UBE2D2P62837 147 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 RPL32P62910 135 aaKnown RBP10.86□□□□□ -0.67
LMO4-201ENST00000370542 ERCC8Q13216 396 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 TMEM78Q5T7P6 136 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 SYT8Q8NBV8 401 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 RNF183Q96D59 192 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 VPS13DQ5THJ4 4388 aa10.86□□□□□ -0.67
LMO4-201ENST00000370542 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 A8MWV9 139 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 TSPAN13O95857 204 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 ASIPP42127 132 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
LMO4-201ENST00000370542 NEXN-AS1Q8NBZ9 246 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
LMO4-201ENST00000370542 ZNF688P0C7X2 276 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 SPANXN1Q5VSR9 72 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 C9orf47Q6ZRZ4 202 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 Q6ZUT4 128 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 CDIP1Q9H305 208 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
LMO4-201ENST00000370542 IGHV3OR16-8A0A075B7F1 116 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 TRAV26-1A0A087WT03 109 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 CMC4P56277 68 aaPredicted RBP10.83□□□□□ -0.68
LMO4-201ENST00000370542 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.68
LMO4-201ENST00000370542 DEFB135Q30KP9 77 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 ZNF575Q86XF7 245 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 Q8TAT8 98 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 LINC00476Q8WZB0 136 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 MSRB1Q9NZV6 116 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 ABCA13Q86UQ4 5058 aa10.83□□□□□ -0.68
LMO4-201ENST00000370542 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
LMO4-201ENST00000370542 SCGB1D4Q6XE38 83 aa10.82□□□□□ -0.68
LMO4-201ENST00000370542 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
LMO4-201ENST00000370542 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 NUPR2A6NF83 97 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 ZNF815PA8K554 130 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 PSMB2P49721 201 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 SUMO2P61956 95 aaKnown RBP10.81□□□□□ -0.68
LMO4-201ENST00000370542 TMEM141Q96I45 108 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 LINC01600Q96MT4 127 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 DPH3P1Q9H4G8 78 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
LMO4-201ENST00000370542 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
LMO4-201ENST00000370542 CEMP1Q6PRD7 247 aaPredicted RBP10.8□□□□□ -0.68
LMO4-201ENST00000370542 Q6Q795 121 aa10.8□□□□□ -0.68
LMO4-201ENST00000370542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.8□□□□□ -0.68
LMO4-201ENST00000370542 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
LMO4-201ENST00000370542 TRBV7-9A0A0J9YWB2 115 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 BUB3O43684 328 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 GAGE5Q13069 117 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 GAGE6Q13070 117 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 APRG1Q8IVJ8 170 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 GLMPQ8WWB7 406 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 LINC00477Q96M19 166 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 DNAH6Q9C0G6 4158 aa10.79□□□□□ -0.68
LMO4-201ENST00000370542 LOC107984156A0A0G2JMH3 177 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 SCGB1C2P0DMR2 95 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
LMO4-201ENST00000370542 RPL35AP18077 110 aaKnown RBP10.78□□□□□ -0.68
LMO4-201ENST00000370542 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
LMO4-201ENST00000370542 MRPL23Q16540 153 aaKnown RBP10.78□□□□□ -0.68
LMO4-201ENST00000370542 ARL17AQ8IVW1 177 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 BAALCQ8WXS3 180 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 ANAPC13Q9BS18 74 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 AGPAT4-IT1Q9H0P7 198 aa10.78□□□□□ -0.68
LMO4-201ENST00000370542 IGHV3-49A0A0A0MS15 119 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 GAS8-AS1O95177 125 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 METTL26Q96S19 204 aa10.77□□□□□ -0.69
LMO4-201ENST00000370542 TRAV21A0A0B4J279 112 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 P0DMU3 169 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
LMO4-201ENST00000370542 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
LMO4-201ENST00000370542 IGHV3OR16-13A0A075B7E8 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms