RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 DEFB104AQ8WTQ1 72 aa13.28□□□□□ -0.28
CUEDC2-201ENST00000369937 BORCS7Q96B45 105 aa13.27□□□□□ -0.29
CUEDC2-201ENST00000369937 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
CUEDC2-201ENST00000369937 A8MWL6 223 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 PRSS1P07477 247 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 TEX261Q6UWH6 196 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 C20orf203Q8NBC4 194 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 CLRN3Q8NCR9 226 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
CUEDC2-201ENST00000369937 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
CUEDC2-201ENST00000369937 J3QL48 77 aa13.25□□□□□ -0.29
CUEDC2-201ENST00000369937 FAM231DQ6ZW35 169 aa13.25□□□□□ -0.29
CUEDC2-201ENST00000369937 GATD1Q8NB37 220 aa13.25□□□□□ -0.29
CUEDC2-201ENST00000369937 GTSF1Q8WW33 167 aa13.25□□□□□ -0.29
CUEDC2-201ENST00000369937 DMBT1Q9UGM3 2413 aaPredicted RBP13.24□□□□□ -0.29
CUEDC2-201ENST00000369937 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
CUEDC2-201ENST00000369937 LYPD6BQ8NI32 183 aa13.24□□□□□ -0.29
CUEDC2-201ENST00000369937 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
CUEDC2-201ENST00000369937 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
CUEDC2-201ENST00000369937 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
CUEDC2-201ENST00000369937 C9orf163Q8N9P6 203 aa13.22□□□□□ -0.29
CUEDC2-201ENST00000369937 SMIM7Q9BQ49 75 aa13.22□□□□□ -0.29
CUEDC2-201ENST00000369937 NCR2O95944 276 aa13.21□□□□□ -0.29
CUEDC2-201ENST00000369937 CT83Q5H943 113 aa13.21□□□□□ -0.29
CUEDC2-201ENST00000369937 RPL39LQ96EH5 51 aaKnown RBP13.21□□□□□ -0.29
CUEDC2-201ENST00000369937 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
CUEDC2-201ENST00000369937 HERC1Q15751 4861 aa13.2□□□□□ -0.3
CUEDC2-201ENST00000369937 FLG2Q5D862 2391 aaPredicted RBP13.2□□□□□ -0.3
CUEDC2-201ENST00000369937 APCSP02743 223 aa13.2□□□□□ -0.3
CUEDC2-201ENST00000369937 FOXA3P55318 350 aaPredicted RBP13.2□□□□□ -0.3
CUEDC2-201ENST00000369937 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.19□□□□□ -0.3
CUEDC2-201ENST00000369937 IGKV3OR2-268A0A0C4DH90 116 aa13.19□□□□□ -0.3
CUEDC2-201ENST00000369937 ZNF727A8MUV8 499 aa13.19□□□□□ -0.3
CUEDC2-201ENST00000369937 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
CUEDC2-201ENST00000369937 MYCBP2O75592 4640 aa13.18□□□□□ -0.3
CUEDC2-201ENST00000369937 SDHAF1A6NFY7 115 aa13.18□□□□□ -0.3
CUEDC2-201ENST00000369937 PMCHP20382 165 aa13.18□□□□□ -0.3
CUEDC2-201ENST00000369937 RNASEKQ6P5S7 137 aaKnown RBP13.18□□□□□ -0.3
CUEDC2-201ENST00000369937 FAM210AQ96ND0 272 aa13.18□□□□□ -0.3
CUEDC2-201ENST00000369937 H7C423 109 aa13.17□□□□□ -0.3
CUEDC2-201ENST00000369937 NDUFS6O75380 124 aaKnown RBP13.17□□□□□ -0.3
CUEDC2-201ENST00000369937 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
CUEDC2-201ENST00000369937 TSKUQ8WUA8 353 aa13.17□□□□□ -0.3
CUEDC2-201ENST00000369937 A0A1B0GUT8 65 aa13.16□□□□□ -0.3
CUEDC2-201ENST00000369937 I3L3M4 83 aa13.16□□□□□ -0.3
CUEDC2-201ENST00000369937 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
CUEDC2-201ENST00000369937 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 CNBPP62633 177 aaKnown RBP13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 BTF3L4Q96K17 158 aa13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 ST20Q9HBF5 79 aa13.15□□□□□ -0.3
CUEDC2-201ENST00000369937 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
CUEDC2-201ENST00000369937 TMEM101Q96IK0 257 aa13.14□□□□□ -0.31
CUEDC2-201ENST00000369937 OSTCQ9NRP0 149 aa13.14□□□□□ -0.31
CUEDC2-201ENST00000369937 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 FGF6P10767 208 aa13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 RPL37AP61513 92 aaKnown RBP13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 TMEM191AQ9H0A3 160 aa13.13□□□□□ -0.31
CUEDC2-201ENST00000369937 TRBV6-5A0A0K0K1A5 114 aa13.12□□□□□ -0.31
CUEDC2-201ENST00000369937 KRTAP29-1A8MX34 341 aaPredicted RBP13.12□□□□□ -0.31
CUEDC2-201ENST00000369937 ZNF25P17030 456 aaPredicted RBP13.12□□□□□ -0.31
CUEDC2-201ENST00000369937 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.12□□□□□ -0.31
CUEDC2-201ENST00000369937 CHCHD10Q8WYQ3 142 aaPredicted RBP13.11□□□□□ -0.31
CUEDC2-201ENST00000369937 RIGQ13278 110 aa13.1□□□□□ -0.31
CUEDC2-201ENST00000369937 TMEM241Q24JQ0 296 aa13.1□□□□□ -0.31
CUEDC2-201ENST00000369937 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
CUEDC2-201ENST00000369937 MRAP2Q96G30 205 aa13.1□□□□□ -0.31
CUEDC2-201ENST00000369937 OR5A1Q8NGJ0 315 aa13.09□□□□□ -0.31
CUEDC2-201ENST00000369937 RAB4AP20338 218 aa13.08□□□□□ -0.32
CUEDC2-201ENST00000369937 KRTAP10-4P60372 401 aaPredicted RBP13.08□□□□□ -0.32
CUEDC2-201ENST00000369937 AMN1Q8IY45 258 aa13.08□□□□□ -0.32
CUEDC2-201ENST00000369937 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
CUEDC2-201ENST00000369937 PPP1R17O96001 155 aa13.07□□□□□ -0.32
CUEDC2-201ENST00000369937 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
CUEDC2-201ENST00000369937 NAT8BQ9UHF3 227 aa13.07□□□□□ -0.32
CUEDC2-201ENST00000369937 V9GYV3 84 aa13.07□□□□□ -0.32
CUEDC2-201ENST00000369937 PANO1I0J062 215 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 GAS8-AS1O95177 125 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 TSHBP01222 138 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 RPS10P46783 165 aaKnown RBP13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 ADIRFQ15847 76 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 HIGD2BQ4VC39 106 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 NUP35Q8NFH5 326 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 ISOC2Q96AB3 205 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
CUEDC2-201ENST00000369937 A0A1B0GVG6 124 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 VCYO14598 125 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 SLPIP03973 132 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 ESDP10768 282 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 FCER1GP30273 86 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 XCL1P47992 114 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 PEA15Q15121 130 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 NAT8Q9UHE5 227 aa13.05□□□□□ -0.32
CUEDC2-201ENST00000369937 TRBV27A0A0K0K1C4 114 aa13.04□□□□□ -0.32
CUEDC2-201ENST00000369937 C7orf77A4D0Y5 90 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms