RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 TMEM95Q3KNT9 176 aa10.66□□□□□ -0.7
PHTF1-204ENST00000369604 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
PHTF1-204ENST00000369604 KLLNB2CW77 178 aa10.66□□□□□ -0.7
PHTF1-204ENST00000369604 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
PHTF1-204ENST00000369604 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
PHTF1-204ENST00000369604 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 MIAQ16674 131 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 C9orf153Q5TBE3 101 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 LITAFQ99732 161 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 CCL21O00585 134 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 NPFFO15130 113 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 KLK9Q2XQG4 91 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.7
PHTF1-204ENST00000369604 LY6EQ16553 131 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 IGHV3-16A0A0C4DH30 117 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 IGHV1-58A0A0C4DH39 117 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 IGF2-ASQ6U949 168 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 PKD1L2Q7Z442 2459 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
PHTF1-204ENST00000369604 EDN2P20800 178 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 LINC01600Q96MT4 127 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 LINC01587Q99440 93 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
PHTF1-204ENST00000369604 BRI3O95415 125 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 LRRK2Q5S007 2527 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 SPANXDQ9BXN6 97 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 SPANXCQ9NY87 97 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
PHTF1-204ENST00000369604 CFAP46Q8IYW2 2715 aa10.62□□□□□ -0.71
PHTF1-204ENST00000369604 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
PHTF1-204ENST00000369604 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
PHTF1-204ENST00000369604 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
PHTF1-204ENST00000369604 VSIG2Q96IQ7 327 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 ABCA12Q86UK0 2595 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 IGHV1OR15-1A0A075B7D0 117 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 CDSNQ15517 529 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
PHTF1-204ENST00000369604 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
PHTF1-204ENST00000369604 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
PHTF1-204ENST00000369604 PROK1P58294 105 aa10.59□□□□□ -0.71
PHTF1-204ENST00000369604 CIRBPQ14011 172 aaKnown RBP10.59□□□□□ -0.71
PHTF1-204ENST00000369604 USMG5Q96IX5 58 aa10.59□□□□□ -0.71
PHTF1-204ENST00000369604 ZANQ9Y493 2812 aa10.58□□□□□ -0.72
PHTF1-204ENST00000369604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
PHTF1-204ENST00000369604 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
PHTF1-204ENST00000369604 ACYP1P07311 99 aa10.58□□□□□ -0.72
PHTF1-204ENST00000369604 DEFB121Q5J5C9 76 aa10.58□□□□□ -0.72
PHTF1-204ENST00000369604 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
PHTF1-204ENST00000369604 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
PHTF1-204ENST00000369604 C3orf22Q8N5N4 141 aa10.57□□□□□ -0.72
PHTF1-204ENST00000369604 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
PHTF1-204ENST00000369604 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 EPG5Q9HCE0 2579 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 NDUFA7O95182 113 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
PHTF1-204ENST00000369604 LY6DQ14210 128 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 DGAT2L7PQ6IED9 249 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 LINC00643Q86TS7 51 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 KLK5Q9Y337 293 aaPredicted RBP10.56□□□□□ -0.72
PHTF1-204ENST00000369604 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
PHTF1-204ENST00000369604 LOC107984640A0A0U1RRK4 108 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 IMUPQ9GZP8 106 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
PHTF1-204ENST00000369604 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
PHTF1-204ENST00000369604 SMCR5Q8TEV8 140 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
PHTF1-204ENST00000369604 CCDC168Q8NDH2 2452 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 HERVK_113P63121 156 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
PHTF1-204ENST00000369604 BAALC-AS2P0C853 105 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 BLCAPP62952 87 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 C19orf54Q5BKX5 351 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 EDA2RQ9HAV5 297 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 SONP18583 2426 aaKnown RBP10.54□□□□□ -0.72
PHTF1-204ENST00000369604 UQCRQO14949 82 aa10.54□□□□□ -0.72
PHTF1-204ENST00000369604 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
PHTF1-204ENST00000369604 Q9H8V8 135 aa10.53□□□□□ -0.72
PHTF1-204ENST00000369604 COX7A2LO14548 114 aa10.53□□□□□ -0.72
PHTF1-204ENST00000369604 Q9UF83 564 aa10.53□□□□□ -0.72
PHTF1-204ENST00000369604 FAM104AQ969W3 186 aa10.53□□□□□ -0.72
PHTF1-204ENST00000369604 H3BUX3 64 aa10.52□□□□□ -0.72
PHTF1-204ENST00000369604 KLRB1Q12918 225 aa10.52□□□□□ -0.72
PHTF1-204ENST00000369604 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.72
PHTF1-204ENST00000369604 RS1O15537 224 aa10.52□□□□□ -0.73
PHTF1-204ENST00000369604 FBXL19-AS1Q494R0 122 aa10.52□□□□□ -0.73
PHTF1-204ENST00000369604 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
PHTF1-204ENST00000369604 LMO4P61968 165 aa10.52□□□□□ -0.73
PHTF1-204ENST00000369604 MYO9AB2RTY4 2548 aa10.51□□□□□ -0.73
PHTF1-204ENST00000369604 PRM2P04554 102 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms