RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GAS8-AS1O95177 125 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 COTL1Q14019 142 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 LAGE3Q14657 143 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 PYY3Q5JQD4 70 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
SNX27-201ENST00000368838 CEMP1Q6PRD7 247 aaPredicted RBP6.22□□□□□ -1.41
SNX27-201ENST00000368838 JPT2Q9H910 190 aa6.22□□□□□ -1.41
SNX27-201ENST00000368838 NUPR2A6NF83 97 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 B5MCH6 92 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 DEFB4AO15263 64 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 NCR2O95944 276 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 HTN1P15515 57 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 GATA1P15976 413 aaPredicted RBP6.21□□□□□ -1.42
SNX27-201ENST00000368838 CRYBA4P53673 196 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 RHOHQ15669 191 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 Q8NAQ8 132 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 OR4C5Q8NGB2 326 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 KIR2DL4Q99706 377 aa6.21□□□□□ -1.42
SNX27-201ENST00000368838 C11orf68Q9H3H3 251 aaKnown RBP6.21□□□□□ -1.42
SNX27-201ENST00000368838 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
SNX27-201ENST00000368838 TRGV1A0A0A0MS02 117 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 HSBP1L1C9JCN9 74 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 F5H697 171 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 ATP5LO75964 103 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 MGPP08493 103 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
SNX27-201ENST00000368838 SSTP61278 116 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 ZNF56Q15929 161 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 PMCHL1Q16048 86 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 Q6ZTI0 123 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
SNX27-201ENST00000368838 MRPL16Q9NX20 251 aaKnown RBP6.2□□□□□ -1.42
SNX27-201ENST00000368838 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 IGHV3OR16-12A0A075B7B8 117 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 I3L3M4 83 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 PRM2P04554 102 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 LINC00694P0DN24 101 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 FAM74A4Q5TZK3 123 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 DAZ4Q86SG3 579 aaKnown RBP6.19□□□□□ -1.42
SNX27-201ENST00000368838 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 PHLDA1Q8WV24 401 aaPredicted RBP6.19□□□□□ -1.42
SNX27-201ENST00000368838 TOMM6Q96B49 74 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
SNX27-201ENST00000368838 DAZ3Q9NR90 486 aaKnown RBP6.19□□□□□ -1.42
SNX27-201ENST00000368838 DKK2Q9UBU2 259 aa6.19□□□□□ -1.42
SNX27-201ENST00000368838 KLK5Q9Y337 293 aaPredicted RBP6.19□□□□□ -1.42
SNX27-201ENST00000368838 NACAE9PAV3 2078 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 TRBV7-3A0A075B6L6 115 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 LOC389332A0A1B0GUA5 103 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 K7EQD1 137 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 C3orf79P0CE67 100 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 FHL2Q14192 279 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 TMEM97Q5BJF2 176 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 Q8N976 141 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 NEXN-AS1Q8NBZ9 246 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 ZNF479Q96JC4 524 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 TIMM17AQ99595 171 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 MAP1LC3CQ9BXW4 147 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 GTSF1LQ9H1H1 148 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 PYGO1Q9Y3Y4 419 aa6.18□□□□□ -1.42
SNX27-201ENST00000368838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
SNX27-201ENST00000368838 TRGV2A0A075B6R0 118 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 IGHV4-28A0A0C4DH34 117 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
SNX27-201ENST00000368838 H3BNG1 76 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 SPART-AS1P0CW21 52 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 UBE2D3P61077 147 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 UBE2D2P62837 147 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 RPL36AP83881 106 aaKnown RBP6.17□□□□□ -1.42
SNX27-201ENST00000368838 LGALS9CQ6DKI2 356 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 TEX43Q6ZNM6 134 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 Q6ZSN1 163 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 ERASQ7Z444 233 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 C20orf203Q8NBC4 194 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
SNX27-201ENST00000368838 TMEM141Q96I45 108 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 TIMM21Q9BVV7 248 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 CYSLTR1Q9Y271 337 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 CSDC2Q9Y534 153 aaKnown RBP6.17□□□□□ -1.42
SNX27-201ENST00000368838 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
SNX27-201ENST00000368838 HERC2O95714 4834 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 TRAV26-1A0A087WT03 109 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 C20orf202A1L168 122 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 H7C423 109 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 TSHBP01222 138 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 C11orf45Q8TAV5 145 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 IFI27L1Q96BM0 104 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 C12orf57Q99622 126 aa6.16□□□□□ -1.42
SNX27-201ENST00000368838 PRO0255Q9UI72 69 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 479.1 ms