RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C20orf78Q9BR46 151 aa9.45□□□□□ -0.9
TPM3-211ENST00000368531 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
TPM3-211ENST00000368531 TRBV27A0A0K0K1C4 114 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 TSHBP01222 138 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 MT-ND6P03923 174 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 FCER1GP30273 86 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 IQCJQ1A5X6 159 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 NIT1Q86X76 327 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 KRTAP1-5Q9BYS1 174 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 MAP1LC3AQ9H492 121 aa9.44□□□□□ -0.9
TPM3-211ENST00000368531 TRAV9-2A0A087WT02 112 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 A0A087WX48 190 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 PHOX2AO14813 284 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 UBE2L6O14933 153 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
TPM3-211ENST00000368531 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
TPM3-211ENST00000368531 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.42□□□□□ -0.9
TPM3-211ENST00000368531 IGKV2-29A2NJV5 120 aaPredicted RBP9.42□□□□□ -0.9
TPM3-211ENST00000368531 TCAPO15273 167 aa9.42□□□□□ -0.9
TPM3-211ENST00000368531 S100A1P23297 94 aa9.42□□□□□ -0.9
TPM3-211ENST00000368531 Q6ZR54 194 aa9.42□□□□□ -0.9
TPM3-211ENST00000368531 LAMTOR2Q9Y2Q5 125 aa9.42□□□□□ -0.9
TPM3-211ENST00000368531 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
TPM3-211ENST00000368531 Q8N976 141 aa9.41□□□□□ -0.9
TPM3-211ENST00000368531 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
TPM3-211ENST00000368531 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
TPM3-211ENST00000368531 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
TPM3-211ENST00000368531 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
TPM3-211ENST00000368531 COLCA2A8K830 154 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
TPM3-211ENST00000368531 ESDP10768 282 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 RAB5AP20339 215 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
TPM3-211ENST00000368531 RBX1P62877 108 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
TPM3-211ENST00000368531 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 Q9HAA7 133 aa9.39□□□□□ -0.91
TPM3-211ENST00000368531 PRSS47A8MTI9 375 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
TPM3-211ENST00000368531 PKIAP61925 76 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 C6orf223Q8N319 242 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 Q8N8P6 123 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
TPM3-211ENST00000368531 IGLV4-60A0A075B6I1 120 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 TRGC2P03986 189 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 FGF6P10767 208 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 UBE2WQ96B02 151 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 LYSTQ99698 3801 aa9.37□□□□□ -0.91
TPM3-211ENST00000368531 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
TPM3-211ENST00000368531 K7EP13 123 aa9.36□□□□□ -0.91
TPM3-211ENST00000368531 VPS13DQ5THJ4 4388 aa9.36□□□□□ -0.91
TPM3-211ENST00000368531 H7C423 109 aa9.35□□□□□ -0.91
TPM3-211ENST00000368531 RPL39P62891 51 aaKnown RBP9.35□□□□□ -0.91
TPM3-211ENST00000368531 LINC00269Q8N2A0 174 aa9.35□□□□□ -0.91
TPM3-211ENST00000368531 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
TPM3-211ENST00000368531 DNAH1Q9P2D7 4330 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 IGKV3OR2-268A0A0C4DH90 116 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 CRPP02741 224 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 DGAT2L7PQ6IED9 249 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 FA2HQ7L5A8 372 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 TMEM18Q96B42 140 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
TPM3-211ENST00000368531 RTL8CO15255 209 aa9.33□□□□□ -0.92
TPM3-211ENST00000368531 LAGE3Q14657 143 aa9.33□□□□□ -0.92
TPM3-211ENST00000368531 ENHOQ6UWT2 76 aa9.33□□□□□ -0.92
TPM3-211ENST00000368531 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
TPM3-211ENST00000368531 TRAV8-3A0A0A6YYJ7 113 aa9.32□□□□□ -0.92
TPM3-211ENST00000368531 J3QL48 77 aa9.32□□□□□ -0.92
TPM3-211ENST00000368531 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
TPM3-211ENST00000368531 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
TPM3-211ENST00000368531 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
TPM3-211ENST00000368531 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
TPM3-211ENST00000368531 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
TPM3-211ENST00000368531 REG3AQ06141 175 aa9.31□□□□□ -0.92
TPM3-211ENST00000368531 SMAGPQ0VAQ4 97 aa9.31□□□□□ -0.92
TPM3-211ENST00000368531 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
TPM3-211ENST00000368531 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
TPM3-211ENST00000368531 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
TPM3-211ENST00000368531 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 K7EMI3 77 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 PSCAO43653 123 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 Q0VG73 95 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 C2orf66Q6UXQ4 117 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
TPM3-211ENST00000368531 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
TPM3-211ENST00000368531 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
TPM3-211ENST00000368531 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 LINC00614P0C842 121 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 TNP2Q05952 138 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
TPM3-211ENST00000368531 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms