RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 XCL2Q9UBD3 114 aa13.18□□□□□ -0.3
UBQLN4-201ENST00000368309 MTORP42345 2549 aa13.18□□□□□ -0.3
UBQLN4-201ENST00000368309 JMJD1CQ15652 2540 aa13.18□□□□□ -0.3
UBQLN4-201ENST00000368309 A8MTW9 85 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 RHODO00212 210 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 WFDC11Q8NEX6 87 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 SPXQ9BT56 116 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 IGHV3-38A0A0C4DH36 116 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 A8MWV9 139 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 C2CD3Q4AC94 2353 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 IGHV3OR16-12A0A075B7B8 117 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 TSPAN13O95857 204 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 ZNF415Q09FC8 603 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 LRRC75A-AS1Q8N1F1 130 aa13.17□□□□□ -0.3
UBQLN4-201ENST00000368309 HIST2H2BCQ6DN03 193 aa13.16□□□□□ -0.3
UBQLN4-201ENST00000368309 FAM104AQ969W3 186 aa13.16□□□□□ -0.3
UBQLN4-201ENST00000368309 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
UBQLN4-201ENST00000368309 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
UBQLN4-201ENST00000368309 SPANXB1Q9NS25 103 aaPredicted RBP13.16□□□□□ -0.3
UBQLN4-201ENST00000368309 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 CFC1BP0CG36 223 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 CFC1P0CG37 223 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 AZU1P20160 251 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 LEPROTO15243 131 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.3
UBQLN4-201ENST00000368309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
UBQLN4-201ENST00000368309 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
UBQLN4-201ENST00000368309 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
UBQLN4-201ENST00000368309 PSMB2P49721 201 aa13.14□□□□□ -0.31
UBQLN4-201ENST00000368309 PRO0461Q9UI25 63 aa13.14□□□□□ -0.31
UBQLN4-201ENST00000368309 TRAV8-3A0A0A6YYJ7 113 aa13.12□□□□□ -0.31
UBQLN4-201ENST00000368309 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
UBQLN4-201ENST00000368309 DNAJC9-AS1A6NH13 148 aa13.12□□□□□ -0.31
UBQLN4-201ENST00000368309 INSP01308 110 aa13.12□□□□□ -0.31
UBQLN4-201ENST00000368309 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
UBQLN4-201ENST00000368309 CHCHD7Q9BUK0 85 aa13.11□□□□□ -0.31
UBQLN4-201ENST00000368309 PYGO1Q9Y3Y4 419 aa13.11□□□□□ -0.31
UBQLN4-201ENST00000368309 C10orf126Q8N4M7 172 aa13.11□□□□□ -0.31
UBQLN4-201ENST00000368309 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
UBQLN4-201ENST00000368309 A4D1N5 150 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 INSL3P51460 131 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 COTL1Q14019 142 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 STHQ8IWL8 128 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 LINC00467Q9BRT7 94 aa13.1□□□□□ -0.31
UBQLN4-201ENST00000368309 A8MZ25 164 aa13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 MUSTN1Q8IVN3 82 aa13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 IGHV3-53P01767 116 aa13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 MRPS36P82909 103 aaKnown RBP13.09□□□□□ -0.31
UBQLN4-201ENST00000368309 H7C2G1 150 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 CCL24O00175 119 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 UBE2D4Q9Y2X8 147 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 UBE2D3P61077 147 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 UBE2D2P62837 147 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.32
UBQLN4-201ENST00000368309 Q6ZUT4 128 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 C1orf158Q8N1D5 194 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 SETXQ7Z333 2677 aaKnown RBP13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 TRGV1A0A0A0MS02 117 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 SCGB1C2P0DMR2 95 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 PIK3CD-AS1Q5SR53 167 aa13.07□□□□□ -0.32
UBQLN4-201ENST00000368309 A0A0J9YXY3 114 aa13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 TSSC4Q9Y5U2 329 aaPredicted RBP13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 TMEM86BQ8N661 226 aa13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 CITED2Q99967 270 aaPredicted RBP13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 TCL1BO95988 128 aa13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
UBQLN4-201ENST00000368309 RS1O15537 224 aa13.05□□□□□ -0.32
UBQLN4-201ENST00000368309 PRSS2P07478 247 aa13.05□□□□□ -0.32
UBQLN4-201ENST00000368309 PTH2Q96A98 100 aa13.05□□□□□ -0.32
UBQLN4-201ENST00000368309 SPANXA1Q9NS26 97 aa13.04□□□□□ -0.32
UBQLN4-201ENST00000368309 J3QR89 54 aa13.03□□□□□ -0.32
UBQLN4-201ENST00000368309 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
UBQLN4-201ENST00000368309 IGHV1-58A0A0C4DH39 117 aa13.03□□□□□ -0.32
UBQLN4-201ENST00000368309 TMEM238C9JI98 176 aa13.03□□□□□ -0.32
UBQLN4-201ENST00000368309 FHL3Q13643 280 aa13.02□□□□□ -0.32
UBQLN4-201ENST00000368309 NDUFA12Q9UI09 145 aa13.02□□□□□ -0.32
UBQLN4-201ENST00000368309 CRYBA4P53673 196 aa13.02□□□□□ -0.32
UBQLN4-201ENST00000368309 Q6ZTI0 123 aa13.02□□□□□ -0.32
UBQLN4-201ENST00000368309 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.33
UBQLN4-201ENST00000368309 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
UBQLN4-201ENST00000368309 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
UBQLN4-201ENST00000368309 GEMIN7Q9H840 131 aaKnown RBP13.02□□□□□ -0.33
UBQLN4-201ENST00000368309 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 NPC2P61916 151 aa13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 TMEM263Q8WUH6 116 aaKnown RBP13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 WFDC10AQ9H1F0 79 aa13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 VSIG2Q96IQ7 327 aa13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
UBQLN4-201ENST00000368309 IGHV3-33P01772 117 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms