RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 CEMP1Q6PRD7 247 aaPredicted RBP8.69□□□□□ -1.02
SYNE1-204ENST00000367248 LINC00269Q8N2A0 174 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 SMIM9A6NGZ8 99 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
SYNE1-204ENST00000367248 MBD6Q96DN6 1003 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 MAJINQ3KP22 176 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 MLST8Q9BVC4 326 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
SYNE1-204ENST00000367248 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
SYNE1-204ENST00000367248 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 INAFM2P0DMQ5 153 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 BVES-AS1Q5T3Y7 98 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 LINC00322Q6ZN03 302 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-204ENST00000367248 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 COX11Q9Y6N1 276 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 LINC01545Q5VT33 79 aa8.68□□□□□ -1.02
SYNE1-204ENST00000367248 A0A0J9YWU9 116 aa8.67□□□□□ -1.02
SYNE1-204ENST00000367248 PRM2P04554 102 aa8.67□□□□□ -1.02
SYNE1-204ENST00000367248 C20orf173Q96LM9 149 aa8.67□□□□□ -1.02
SYNE1-204ENST00000367248 PRSS47A8MTI9 375 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 SOCS3O14543 225 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 IFITM1P13164 125 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 PCP4P48539 62 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 LYRM9A8MSI8 78 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 A0A087WZ39 114 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 PLXNB1O43157 2135 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 CEND1Q8N111 149 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 C9orf118A6NHY6 69 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
SYNE1-204ENST00000367248 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 BRI3O95415 125 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 A0A1B0GXF2 115 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 TOMM6Q96B49 74 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 OPRPNQ99935 248 aaPredicted RBP8.65□□□□□ -1.02
SYNE1-204ENST00000367248 CFC1BP0CG36 223 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 CFC1P0CG37 223 aa8.65□□□□□ -1.02
SYNE1-204ENST00000367248 SIGMAR1Q99720 223 aa8.65□□□□□ -1.03
SYNE1-204ENST00000367248 KIAA1549Q9HCM3 1950 aa8.65□□□□□ -1.03
SYNE1-204ENST00000367248 TRAV10A0A0B4J240 114 aa8.65□□□□□ -1.03
SYNE1-204ENST00000367248 IGHV4-30-4P0DP06 118 aa8.64□□□□□ -1.03
SYNE1-204ENST00000367248 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
SYNE1-204ENST00000367248 RS1O15537 224 aa8.64□□□□□ -1.03
SYNE1-204ENST00000367248 K7ERJ3 54 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 REG3AQ06141 175 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 SND1-IT1Q9HBX3 110 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 CXCL5P42830 114 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
SYNE1-204ENST00000367248 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 MIFP14174 115 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 ETDBQ3ZM63 59 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 NDUFA7O95182 113 aa8.62□□□□□ -1.03
SYNE1-204ENST00000367248 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
SYNE1-204ENST00000367248 C14orf177Q52M58 125 aa8.61□□□□□ -1.03
SYNE1-204ENST00000367248 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
SYNE1-204ENST00000367248 K7EP34 96 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 Q6ZVH6 145 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 KIR2DL5BA0A0G2JN68 375 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 KIR2DL5BA0A0G2JPC4 375 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 PROK1P58294 105 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 KIR2DL5AQ8N109 375 aa8.6□□□□□ -1.03
SYNE1-204ENST00000367248 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
SYNE1-204ENST00000367248 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 MTORP42345 2549 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 EDN2P20800 178 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 MUSTN1Q8IVN3 82 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 Q8N976 141 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 PTPRSQ13332 1948 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 A0A1W2PPM0 123 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 Q6ZUT4 128 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 FOXI1Q12951 378 aa8.59□□□□□ -1.03
SYNE1-204ENST00000367248 A4D1N5 150 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 E9PLD3 99 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 CLUHP3Q96NS8 147 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 ANAPC13Q9BS18 74 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 ODF1Q14990 250 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 UBL5Q9BZL1 73 aa8.58□□□□□ -1.04
SYNE1-204ENST00000367248 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 CRIP1P50238 77 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-204ENST00000367248 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 IGLV2-11P01706 119 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-204ENST00000367248 H0YGX0 51 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 CFAP126Q5VTH2 177 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
SYNE1-204ENST00000367248 H3BMG7 143 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms